Planctellipticum variicoloris: SH412_004318
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Entry
SH412_004318 CDS
T09866
Name
(GenBank) pilus assembly protein N-terminal domain-containing protein
KO
K02280
pilus assembly protein CpaC
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SH412_004318
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvar02044
]
SH412_004318
02035 Bacterial motility proteins [BR:
pvar02035
]
SH412_004318
Secretion system [BR:
pvar02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
SH412_004318
Bacterial motility proteins [BR:
pvar02035
]
Pilus system
Pilus assembly proteins
SH412_004318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
DUF7011
Motif
Other DBs
NCBI-ProteinID:
WLD14143
LinkDB
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Position
5550101..5551699
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AA seq
532 aa
AA seq
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MSGARFGRSGRRLAACTTLAGLIFSGTVPDLSAQPPAQVSTVGTVEKVTDLVDEVLSSEV
ELKVMKRRSKILRLKQDVYRAAVADPSLVEFVAYGAKEVEVIGKEVGSTTVTLWIGDENQ
PRLLSVLVNVVKDEGVDDTRRLEYGELQEMINELFPNSKVQLFPVADKVIVRGQARDEQE
AVQIMSIIRRNADQQQNNAFNGGVGQGAWTAQGDAAQPFPDASKLPDATVVNMLRIPGEK
QVLLKVRIAELKRSAIRKLGSNFAFNIDDIALASTLTTGGNILASGVFDNSSFNLVLSAL
SSNGTAKILAEPNLVTLSGQPANFIAGGEFAVPTVVGVGGAQAATTTFKGYGTQLAFTPT
VLDKDRIRIHVAPTFSTLNKENTVGGVFGLDTRSVSTTVDLREGQVLAIAGLLQEQQRGS
VDRIPLFGSIPILNAITANRTTSKDETELIVLVSPELVHAMEPEDAPSILPGMEVTDPDD
LEFFIFGHIEGRQEVHHRSTVWAQYRDNLKHCRKASKSSDCYYINGPHGFSE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgctcgattcgggcggtcgggacggaggctggcggcttgtacgacgctggcg
ggactgattttctcggggaccgtccccgatctctcggcacaaccgccggctcaagtctcg
acggtgggaaccgtcgagaaagtcaccgatctcgtcgacgaggtcctctcgtccgaagtc
gaactgaaggtgatgaagcggcgctcgaaaatcctgcggctgaagcaggacgtctatcgc
gccgcggtcgccgatccgtctctcgtggaattcgtcgcctatggcgcgaaggaagtcgag
gtcatcggcaaagaagtcggcagcacgaccgtgaccctctggatcggcgatgagaatcag
ccccggctcctgagcgtcctcgtgaacgtcgtcaaagacgaaggggtcgacgacacccgt
cgcctggaatacggcgaactccaggaaatgatcaacgagctgtttcccaacagcaaagtg
cagctcttcccggtcgccgacaaggtgatcgtccgcggccaggctcgcgacgagcaggaa
gcggtgcagatcatgtcgatcatccgccggaacgcggatcagcagcagaacaacgccttc
aacggcggcgtcggacagggggcctggacggcccagggcgacgccgctcagccgttcccg
gacgcctcgaagctgccggacgccaccgtcgtcaacatgctgcgaattccgggcgagaag
caggtgctgctgaaggtccggatcgcggaactcaagcgatccgccattcgcaagctcggg
tccaacttcgcgttcaatatcgacgacatcgcgctggcgtcgacgctcaccacggggggg
aacatcctcgccagcggcgtcttcgacaacagcagctttaatcttgttctgtcggctctc
tcgtccaacgggactgcgaaaattctcgcggaaccgaacctggtgacgctcagcgggcag
cccgcgaacttcatcgcgggcggtgaattcgccgtcccgaccgtcgtcggcgtcggcggc
gcccaggcggcgacgacgaccttcaaaggctacggaacgcagctcgcgttcaccccgacc
gtcctcgacaaggatcggatccggattcacgtcgcccccacgttcagcacgctgaacaag
gagaatacggtcggcggcgtgttcggcctcgatacgcgatcggtctcgaccaccgtcgac
cttcgcgaggggcaggtcctcgccatcgccggactcctccaggaacagcagcgcggcagc
gtggatcgtatcccgctgttcggcagcatcccgattctgaacgccatcacagcgaaccgg
acgacgtcgaaggacgaaaccgaactcatcgttctggtcagtcccgaactcgtgcacgcc
atggagccggaagacgcgccgtcgatcctgccggggatggaggtcaccgatccggatgac
ctggagttcttcatcttcggccatatcgaaggccggcaggaagtgcaccaccgcagcacg
gtgtgggcgcagtatcgcgacaatctcaagcactgccgcaaggcgagcaagtcgagcgac
tgctactacatcaacggaccgcacggcttttcagaatag
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