Planctellipticum variicoloris: SH412_004392
Help
Entry
SH412_004392 CDS
T09866
Name
(GenBank) glycosyltransferase family 4 protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00540
Lipopolysaccharide biosynthesis
pvar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SH412_004392
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvar01005
]
SH412_004392
Lipopolysaccharide biosynthesis proteins [BR:
pvar01005
]
Core region
SH412_004392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_1_2
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
WLD14217
LinkDB
All DBs
Position
5646659..5647828
Genome browser
AA seq
389 aa
AA seq
DB search
MRIALILKYLDPARGGAEQWTFQMAARMVRAGHEVVHIGQAQSSEVSAAGIGWVPVPPTH
GVTGFADAVERTSCGRDFDVLADMGHSWTGDVILPHGGSRQASLQQNDLLVSPALRWVRR
GLQAVAPRYRQQLDLQRRQFDVADGRLIIALSEMTERHYRTLDHVPTAAIRQVYNGVDIE
RFSPARCQSLRSAQRTAWGFAGQETVFLLVAHNFALKGVRELIAAFAAVARKDSNARLVI
AGKDRPGRYRRQADRLGCGNRVQFVGAIADSLAAYAAADAYVHPTYYDPCSLTVLEALAC
GLPVITTEFNGAGELVTPGQEGFVIPVPWSLDELEKAMTALLDADLRQAMSQEACELAID
HSLDRNYHEFLAVLSEAANRRTAPVRRAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccctgattctcaaatacctggaccccgcccgcggcggcgccgagcagtgg
acgtttcagatggccgcccgcatggtccgggccgggcacgaagtggtccacatcggccag
gctcagtcctccgaagtctccgcggcgggcatcggctgggttccggttccgccgacgcac
ggagtgaccggctttgcggacgcggtcgagcggacatcctgcggccgggacttcgacgtc
ctcgccgacatgggacactcctggacaggcgacgtgatcctgccgcacggcggctcgcgc
caggcctcgttgcagcagaacgatctgctcgtttctccagccctgcgctgggtccgccga
ggattgcaggcggtcgcgccccgttatcgccagcagctcgatctgcagcgacgacagttc
gatgtggccgacggccggctgatcatcgccctgtcggagatgaccgaacgacactaccgg
acgctggaccacgttccgacggccgcaatccgccaggtctacaacggcgtcgacatcgaa
cggttctcgcccgcgcgctgccagtcgctccggtccgcacaacggacggcctggggtttc
gccggtcaggaaaccgtcttcctgctggtcgcccataacttcgctctgaagggcgttcgc
gaattgatcgccgccttcgccgcagtcgcccggaaggactcgaacgcgcgcttagtcatt
gccggtaaggatcggccgggacgctaccggcggcaagccgatcggctgggctgcggcaac
cgcgtgcagtttgtcggtgcgatcgcggattccctggccgcctatgcggcggcggacgcc
tacgtccacccgacctactacgacccctgcagcctgacggttctggaggcgctggcctgc
gggctgccagtcatcaccacagagttcaacggcgcgggggaactagtcactcccggccag
gaaggtttcgtgatcccggtcccgtggagcctcgacgagctggagaaggcaatgacggcc
ctgctggacgccgacctgcggcaggcgatgagtcaagaagcctgcgagctggcaatcgat
cattcgctcgaccggaactaccacgagttcctggcggtgttgagcgaagccgccaaccgc
cgcacagcccccgtccgtcgggctgcctga
DBGET
integrated database retrieval system
