KEGG   Planctellipticum variicoloris: SH412_004543
Entry
SH412_004543      CDS       T09866                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pvar  Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvar02048]
    SH412_004543
Enzymes [BR:pvar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SH412_004543
Prokaryotic defense system [BR:pvar02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SH412_004543
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 HSDR_N HSDR_N_2 Helicase_C AAA_30 AAA_19 SLFN-g3_helicase XLF_CC
Other DBs
NCBI-ProteinID: WLD14363
LinkDB
Position
complement(5850413..5853802)
AA seq 1129 aa
MPSNFDFLQPHWASLHDDASQAEGNVYVSPRTAVFYARRTLERAVQWLYAHDGGLSKPYQ
ENLAALIHEPTFREILPATQFQHARLIVKLGNQAVHSDTPINATDALHLTRMLHAFLGWV
ARIYGKPQPTVPAFDDGLLTRPQAPAPDRSADQIRQLLDQLTQKDAELAAKAARLAETDA
EIARLKQEIAAQRAAREQVVPVDEVSEAATRDLFIDVLLREAGWDPHGPQVHEYPVTGMP
TGTGQGFVDYVLWGQDGRPLAVVEAKRTRVDPQNGKRQAELYADCLEQAFGQRPVIYYTN
GYETWCWDDASYPPRSVQGFRTRDELQLLIHRRDSRQGIVTASANRDIADRYYQQEAIRR
VCETYDRDRQRHALLVMATGTGKTRLSIAAVELLMKHNWVRRVLFLADRNALLTQARRAF
TKFLPNTASVDITQAKERDDSRIVFSTYPTMMNAIDDERRDGVNRFGVGHFDLVIIDEAH
RSVYQKYRAIFEYFDALLLGLTATPRSEVDRDTYGLFHLEQNVPTHAYELDQAVADGYLV
PPQPIAVPTKFSRQGVKYADLTDDEKKEYEVKFFDEETGAVPDEIDASALNRWLFNADTV
DKVLAYVMGHGQHIEGGDKLGKTILFAANHNHAQFVVDRFDANYPHLKGKFCSLIDNQVK
FAQSLIDDFSLPAKPPQIAVSVDMLDTGIDVPECVNLVFFKRVRSRTKFWQMIGRGTRLC
PDLFGPGLDKKSFAVLDFCENFEFFGKNPDGVEGSVQESVKTKIFRRRVSLLDLLRSERH
GDEPHRKLRTEIADHLHREVSQVPLDSFVVRPHRREIEKFSKREAWDQLSPGELVDIHQH
LANLPTPDDGDEFARRFDLLLLNLQLGILEASPHVPRWQNQVHGIAAGLEEKEAIPAVRQ
HLALIQELQTEEYWQHITLPMLEDVRRNLRALVQFLDREGKRDNVYTDFEDELGDAKEIE
GLIQPDSRLGNYRLKVERFVRQHQDHPTIDRLRRNQPISTTDLQALEAILFAENGPGGRD
QFEQTYGTDMPLGKLIREIVGLDANAAKEAFAQFLAAGTLTGDQITFINQIIDHLVHNGL
MDPKALFEPPFTDFHDQGISGVLPHLAPQIVQVIRAINGNALATGGRAI
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgccctccaacttcgacttcctgcagccccactgggccagcctgcacgatgacgccagc
caggcggaggggaatgtctacgtctcgccccggacggccgtgttctacgcccgccgaacc
ctcgaacgggccgtgcagtggctctacgcccacgatggcgggctgtcgaagccgtaccag
gaaaacctcgccgccctgatccacgagccgacgttccgggagatcctgccggccacacag
ttccagcacgcccggctgatcgtaaagctggggaaccaggcggtccacagcgacacgccg
atcaacgccaccgacgccctgcacctgacccgcatgctgcacgccttccttggctgggtg
gcgcggatctatggcaaaccccagccaaccgttccggcgttcgacgacgggcttttgacc
cgcccccaggccccggcccccgaccgcagcgccgaccagatccggcaactgctggaccag
ctcacccagaaggacgccgaactggcggccaaagcagcccggctggcagagaccgacgcg
gaaatcgcccggctgaagcaggaaatcgccgcgcagcgggccgcccgcgaacaggtcgtc
cccgtcgacgaagtcagcgaggcggccacccgcgacctgtttatcgacgtgctgcttcgg
gaggccggctgggacccgcacggcccgcaggtccacgaatatccggtgaccggcatgccg
accggcaccggccagggcttcgtcgattacgtgctgtggggccaggacgggcggcccctc
gccgtcgtcgaagccaaacggacacgggtcgacccgcagaatggcaagcgccaggcggag
ctgtatgccgactgtctggaacaggcgttcgggcagcggccggtgatctactacaccaac
gggtatgaaacctggtgctgggacgacgccagttatcccccgcggtccgtccagggcttc
cgcacccgcgacgagctgcagctcctgattcatcgccgggacagccggcaggggatcgtg
acggccagcgccaaccgcgacattgccgaccgatactatcaacaggaagccatccgccgg
gtctgcgagacgtacgaccgggaccggcagcggcacgccctgctggtgatggccacgggg
accggcaagacccggctgagcatcgccgcggtcgaactgctgatgaagcacaactgggtc
cggcgggtgctgttcctggccgaccgcaacgcactgctgacgcaggccaggcgggccttc
accaagttcctgccgaacacggcgtcggtcgacatcacgcaggccaaggagcgggacgac
agccggattgtcttctcgacctaccccacgatgatgaacgccattgacgacgagcggcgg
gacggcgtgaaccgcttcggcgtcggacacttcgacctggtgatcatcgacgaggcccac
cgcagcgtctaccagaagtaccgggcgatcttcgagtatttcgacgccctgctgctggga
ctgacggccaccccccgcagcgaggtcgaccgggacacctacggcctgttccacctcgaa
cagaacgtcccgacgcacgcctacgagctggaccaggcggtcgccgacgggtacctggtt
ccgccccagccgattgcggtcccgacgaagttcagccggcagggggtgaagtacgccgac
ctgacggatgacgagaaaaaggagtacgaggtcaagttcttcgacgaggagacgggcgcg
gttccggacgaaatcgacgcgtcggccctcaaccgctggctgttcaacgccgacaccgtc
gacaaggtgctggcctacgtgatggggcacgggcagcacatcgaggggggcgacaagctg
gggaagacgattctcttcgccgccaaccacaaccacgcccagttcgtggtcgaccggttc
gacgccaattatccgcacctgaaggggaagttctgctccctgatcgacaaccaggtaaag
ttcgcccagtcgctgatcgacgacttcagcctgccggccaagccgccacaaatcgcagtc
agcgtggacatgctggataccggcatcgacgtgccggagtgcgtgaacctggtcttcttc
aagcgggtgcggtcccggacgaagttctggcagatgatcggccggggaacccggctttgc
ccagacctgttcggccccggtctcgacaagaaatcattcgccgtgttggacttctgcgag
aactttgagttctttggcaagaaccccgacggcgtcgagggatcagtccaggaatcggtg
aagacgaaaatctttcgccggcgggtctcgctgctggacctgctgcggtcagaacgccac
ggcgatgaaccgcaccgcaagctgcggacggaaattgccgaccacctgcaccgggaggtg
tcgcaggtccccctcgacagtttcgtggtccggccgcaccggcgggagatcgagaagttc
agcaagcgggaggcgtgggaccagttgagccccggcgagctggtcgacatccaccagcat
ctggcaaacctgccgacgcccgacgatggcgatgaattcgcccggcggttcgacctgctg
ctgctcaacctgcagctcggaatcttggaggcatcgcctcacgtcccgcgctggcagaac
caggtccacggcatcgccgccggtctggaggagaaagaggccatcccggccgtccggcag
catctggcgctgatccaggagctgcagacggaggaatactggcaacacatcacactcccc
atgctggaagacgtccggcggaacctgcgggcgctggtgcagttcctcgaccgggagggg
aagcgggacaacgtctacacggacttcgaggacgagctgggcgatgcgaaggaaattgaa
gggctgattcagcccgacagccggctggggaattaccggctgaaggtggaacggttcgtg
cgccagcaccaggaccacccgaccatcgaccgactgcgccgtaaccagccgatcagcact
accgacctgcaggccctggaggcgattctgttcgcggaaaacggccccggcggccgggac
cagttcgagcagacatacggcaccgacatgccactgggaaaactgatccgggagatcgtc
ggcctggacgccaacgcggcgaaagaggcgttcgcccagttcctcgccgcgggaacgctg
accggcgaccagatcacgttcatcaaccagatcatcgaccacctggtccacaacggcctg
atggacccgaaggccttgttcgaaccgccgttcaccgatttccacgaccagggcatcagc
ggcgtcctgccccacctggccccgcagatcgtgcaggtgatccgggcgatcaacggcaac
gcgctggcgacgggcgggcgcgcgatttga

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