Planctellipticum variicoloris: SH412_004668
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Entry
SH412_004668 CDS
T09866
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SH412_004668 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvar03400
]
SH412_004668 (mutY)
Enzymes [BR:
pvar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SH412_004668 (mutY)
DNA repair and recombination proteins [BR:
pvar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SH412_004668 (mutY)
Prokaryotic type
SH412_004668 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
DUF1823
Motif
Other DBs
NCBI-ProteinID:
WLD14484
LinkDB
All DBs
Position
complement(6012874..6013911)
Genome browser
AA seq
345 aa
AA seq
DB search
MLKWHAQHGRELPWRNQRDAYLVWISEIMLQQTTVVAVKPYFDRFLQRFPSVRELAAADE
SDVLRLWEGLGYYSRARNLHRAAQVVVEQFGGEFPSEPAVLESLPGVGRYTAGAIASFAY
NRRAPIVEANTLRLYCRLLGYDGDPRSTAGQRVLWEFAEKILPATGAGEFNQALTDLGAT
VCTPSQPDCDHCPAKTCCVAAAEGRQHELPRPAKRPEITSVTEAYVAVCHEGKYLLRQRT
AEERWAGLWDFLRYPLEDHAATFALQGLVRDQTGLQIELGPQVAEFQHSVTRYRITLKCH
VARRTGGRLTVRETPAEWVAAERFGEYPLSVTGRKLAGVLGAVGS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaagtggcacgcacagcatggacgcgagctgccgtggcggaatcagcgggatgcc
tatctcgtctggatcagcgagatcatgctgcagcagacgaccgtcgtggcggtgaaaccg
tacttcgaccggtttctgcagcggtttccgtcggtccgggagctggcggcggctgacgag
agcgacgtgctgcggttgtgggaggggctgggctattacagccgggcgcggaacctgcat
cgggccgctcaggtcgtcgtcgagcaattcggcggagagtttccgtcggaacctgcggtc
ctggaatcgctgccgggggtcgggaggtacaccgccggggcgattgcatcgttcgcctac
aaccggcgggcgcccatcgtcgaagcgaacacgctgcggttgtactgccggctgctcggc
tacgacggcgatccgcggtcgacggccgggcagcgggtgctgtgggaattcgccgaaaag
atcctgccggcgaccggggcgggggagttcaaccaggcgctgaccgacttgggggcgacc
gtctgcacgccgtcgcagcccgactgcgaccactgtcccgcgaagacgtgttgcgtcgcc
gcggcggaaggccgccagcacgaacttccgcgaccggcgaagcggccggagatcacgtcg
gtcaccgaggcgtatgtggcggtctgccacgagggaaaatatctgctgcggcagcggacc
gccgaggagcgctgggcggggctgtgggatttcctgcgctatccgctggaggatcatgcg
gcgacgttcgcgttgcagggtctcgtgcgcgatcagaccgggctgcagattgaactggga
ccgcaggtggcggaattccagcacagcgtgacgcgataccggattacgctgaaatgccac
gtcgcccggcggaccggcggacggctgacggtccgggaaacgcccgcggaatgggtggcc
gccgagcggttcggggagtatccgttgtcggtgacggggcggaagctggcgggagttctc
ggggccgttgggagttga
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