Planctellipticum variicoloris: SH412_004710
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Entry
SH412_004710 CDS
T09866
Name
(GenBank) isocitrate/isopropylmalate family dehydrogenase
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00020
Citrate cycle (TCA cycle)
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
pvar01120
Microbial metabolism in diverse environments
pvar01200
Carbon metabolism
pvar01210
2-Oxocarboxylic acid metabolism
pvar01230
Biosynthesis of amino acids
Module
pvar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvar_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SH412_004710
Enzymes [BR:
pvar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
SH412_004710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WLD14523
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All DBs
Position
6053998..6055167
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AA seq
389 aa
AA seq
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MHHVTLIPGDGTGPEITEATRRCLEATGVKFDWDVQECGIEVIEKLGKVPESVLASVRKN
QVALKGPITTPIGKGFRSVNVYLRQELGLYACLRPCKTYKGVRSFFSGVNVDLVIVRENT
EDLYAGVEFQAGLPATAELIDFINSKATGRKISTGKATTGVSIKPMSYEGTRNIANFAFD
YAVKAGRKSVTSVCKANIMKFTDGLWYDETRAVAAAYGAKFEQPELKVAPDAELAGKTTD
ASQVAYMERLIDNMCMQLVQKPEQYDVILLSNLYGDILSDLCAGLVGGLGVAPGANIGPS
SAIFEATHGSAPKYKGQNKVNPTALILSGKLMLEHLGEKAAAEKLEAAVAAVIAEGKDVT
YDMKPHRTDPTAVGTAQMADAIIAKMQSM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgtcacgctgattccgggcgatgggaccggaccggaaattaccgaagccacc
cgtcgttgtctcgaagcgaccggcgtcaaattcgactgggacgtccaggaatgcggcatc
gaagtgatcgagaagctgggcaaggtccccgagtcggtgctggcgtcggttcgcaagaat
caggtcgccctcaaggggccgatcacgacgccgatcggcaagggttttcgcagcgttaat
gtctatctgcgtcaggagttggggctttacgcctgtctccgtccctgcaagacgtacaag
ggggtccggagcttcttttcgggcgtgaacgtcgacttggtgatcgtccgcgagaacaca
gaagacctctacgcaggggttgagttccaggctggtttgcccgcaaccgccgagctgatc
gacttcatcaattcgaaagccacgggtcggaagatcagcacgggtaaggcgacgaccggc
gtcagcatcaagccgatgtcgtacgagggaacccggaacatcgccaatttcgcgttcgac
tacgccgtgaaggcgggacggaagtcggtgacttcggtctgcaaggcgaacatcatgaag
ttcaccgacgggctgtggtacgacgagacccgggccgtcgccgccgcctacggcgcgaag
ttcgagcagcccgagctgaaggtcgccccggacgccgaactggccggcaagacgaccgac
gccagccaggtcgcctacatggagcggctgatcgacaacatgtgcatgcagctcgtgcag
aagcccgagcagtatgacgtgattctgctatccaacttgtacggcgacatcctgagcgat
ctgtgcgcgggcctggtggggggactgggcgtcgcgcccggagcgaacatcggtccgtcg
tcggcgatcttcgaagcgacgcacggcagcgcgccgaagtacaagggccagaacaaggtc
aacccgaccgcgttgatcctgtccggcaagctgatgctggagcacctgggcgagaaggcc
gcggccgagaagctggaagccgccgtcgctgccgtgatcgccgaaggcaaggacgtgacc
tacgatatgaagcctcatcggaccgatccgacggcggtcggaacggctcagatggccgac
gcgatcatcgccaagatgcagtcgatgtag
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