Planctellipticum variicoloris: SH412_004789
Help
Entry
SH412_004789 CDS
T09866
Name
(GenBank) hypothetical protein
KO
K02409
flagellar M-ring protein FliF
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SH412_004789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvar02044
]
SH412_004789
02035 Bacterial motility proteins [BR:
pvar02035
]
SH412_004789
Secretion system [BR:
pvar02044
]
Type III secretion system
Flagellar export apparatus
SH412_004789
Bacterial motility proteins [BR:
pvar02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
SH412_004789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
Motif
Other DBs
NCBI-ProteinID:
WLD14600
LinkDB
All DBs
Position
6142592..6144217
Genome browser
AA seq
541 aa
AA seq
DB search
MDVLNRIARQFQELFSRMTPSQRGTLIVVPLLVVAAFAMLLWSQPGASYTALSWGKVFST
DELMKTEQALIEANLTGFRREGQRIMVPAGEADRYNAALLEFDAMPADMGAELLRKFENL
GPFSTDRQRQDMKEALLLQELQRMIMAVPDIEHARVGIANSGRPNSWSRKNHVTANVTVR
PRAGRELSQRLVTSLRAAVSSMVPDLKPSDVTIFDVVNAVSYTGESTDDPFNSGPVNRIR
ELTRQYEQQIQKDLSYIPGVGVTVHVDVDNLKSSVTRSQVVDPKKSADVYSSEFSTTDNV
QQRPPKGEAGLRANQPGALAAAAAPERTRQLNESGTNAIRGVSFEVTEKALIAAMPKAVQ
VSVKIPRDYYREIADQRTAAGEKDPARTDAMQIEQDVLANVQKSVARLIPTGSPVDAITV
TSFERVEANAADTPIVWSIRITELVRQWGGPAGMVLLALAALVILRRQMKSLPAEASSMA
SAAGLSAGQTIPGMPGAVTAPATMEEIVLKDMPKRELIQNLARDNPEMTANVIGKWLQAA
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctgaaccgcatcgcccgccagtttcaggagctgttttcccgcatgacgccg
agtcagcgcgggacgctcatcgtcgtgcccctgctggtggtcgcggcgttcgccatgctg
ctgtggtctcagccgggggcttcgtacacggcgctgtcgtggggcaaggtcttctcgacc
gacgagctgatgaagacggagcaggccctgatcgaagccaatctgacgggcttccggcgg
gaaggtcagcggatcatggttccggccggcgaagccgaccgctacaacgcggcgctgctc
gagttcgacgccatgccggcggacatgggggcggaactgctgagaaagttcgagaacctc
ggaccgttcagcaccgaccgtcagcgtcaggatatgaaggaagcgctgctgctgcaggaa
ctgcagcggatgatcatggccgtccccgatatcgaacacgcgcgggtcggaatcgccaat
tcgggccgcccgaacagttggagccggaagaaccacgtcacggcgaacgtaacggtccga
ccgcgcgccggtcgggagctgtcacagcggctggtgacgtcgctgcgggcggcggtgtcg
agcatggtccccgacctgaagccgtcggacgtgacgattttcgacgtcgtcaacgccgtc
agctatacgggcgaatccaccgacgatccattcaacagcggcccggtcaatcggatccgc
gaactgacccgccagtacgagcagcagattcagaaagatctgtcgtacatcccgggcgtc
ggagtgacggttcatgtcgatgtcgacaatctgaaatcgtcggtcacccgcagtcaggtc
gtggatccgaagaagtccgcggacgtctattcgagcgagttcagcaccaccgacaacgtc
cagcagcgcccgccgaagggcgaagccggtctccgggcgaatcagccgggggcgctggcg
gcagcggccgcgccggagcgaacccggcagttgaacgaatcgggaacgaacgccattcgc
ggcgtctcgttcgaggtcaccgagaaggcgctgattgcggccatgccgaaggcggttcag
gtcagcgtgaagattccgcgggactactaccgggagatcgccgatcagcggaccgcggcg
ggggaaaaagatcccgcccggaccgacgcgatgcagatcgaacaggatgtgctggcgaac
gtccagaaatcggtggcgcggctgatccccacgggatcgccggtcgacgcgattacggtg
acttcgttcgagcgcgttgaggccaatgcggcggatacgccgatcgtctggagcatccgg
atcaccgaactggtccggcagtggggcggcccggcaggaatggtgctgctggcgctggcc
gccctggtgatcctgcggcggcaaatgaagtcgctccctgcggaagcgtcgtcgatggcc
agcgccgccggtctgtcggcgggccagacgattccgggaatgcccggcgcggtgacggcc
ccggcgaccatggaggaaatcgtcctgaaggacatgcccaagcgcgagctgattcagaat
ctggcgcgggacaaccccgagatgacggcgaacgtgatcgggaaatggctgcaggccgcc
aagtag
DBGET
integrated database retrieval system