Planctellipticum variicoloris: SH412_004798
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Entry
SH412_004798 CDS
T09866
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02020
Two-component system
pvar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SH412_004798
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH412_004798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvar03000
]
SH412_004798
Transcription factors [BR:
pvar03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SH412_004798
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GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
GntR
Motif
Other DBs
NCBI-ProteinID:
WLD14608
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Position
6152888..6153649
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AA seq
253 aa
AA seq
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MERHWYLKRCRLFERLPPEQLARLNGVSRQKTFPKGSSVYLPSDVSQGVMLVAEGRIRLS
SLTPDGKQAILAFIEPGEVFGELALVDGGTREEYAEAVVTSTVILLPGDVLQDLLLESPQ
FSLGITRLIGLRRRRVERRLKSLLFRSTRERLGSLLLELVEQYGRPVPEGVLIDLKLSHQ
DLASIIGATRESVTLLLGELHTEGLVQIGRQRVVIRAPERMARSLGLPVPDLPGTPVPRP
GLASTRPAAESPG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcactggtacctcaaacgctgtcggttgttcgagcggctgccgcccgagcag
ctcgcgcgcttgaacggcgtatcgcgccagaagacgtttcccaaggggtcgtcggtctat
ctcccctccgacgtttcccagggggttatgctcgtggcggaaggacgaatccggctgagc
agcctgacccccgacgggaaacaggccatcctggcgtttatcgagccgggggaagtcttc
ggcgaactcgcactggtggacggcggcacgcgcgaagagtacgccgaggccgtggtgact
tcgacggtgatcctgctgccgggagacgtcctgcaggatctgctgctggagtccccgcag
ttctcgctcggaatcacccggctgatcggcctgcgccgccggcgcgtcgaacggcgcctg
aagagtctgctgttccggtccacgcgggaacggctcgggagcctgctgctggaactggtc
gagcaatacggacgcccggttcccgagggagtgctgatcgatctgaaattgtcgcatcag
gatctggcgagcattatcggcgcgacgcgcgaatcggtgacgctgctgctgggcgagttg
catacggaaggactggttcagatcggccgccagcgagttgtgatccgggcccccgaacgg
atggccaggtcgctcggactgccggttccggatcttccgggaaccccggtgccccgtccg
ggacttgcgtcgacgcgaccggccgccgaatcgccaggatga
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