Planctellipticum variicoloris: SH412_004869
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Entry
SH412_004869 CDS
T09866
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00270
Cysteine and methionine metabolism
pvar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SH412_004869 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvar03000
]
SH412_004869 (dcm)
03032 DNA replication proteins [BR:
pvar03032
]
SH412_004869 (dcm)
03036 Chromosome and associated proteins [BR:
pvar03036
]
SH412_004869 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pvar02048
]
SH412_004869 (dcm)
Enzymes [BR:
pvar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SH412_004869 (dcm)
Transcription factors [BR:
pvar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SH412_004869 (dcm)
DNA replication proteins [BR:
pvar03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SH412_004869 (dcm)
Chromosome and associated proteins [BR:
pvar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SH412_004869 (dcm)
Prokaryotic defense system [BR:
pvar02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SH412_004869 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
WLD14678
LinkDB
All DBs
Position
complement(6237173..6238414)
Genome browser
AA seq
413 aa
AA seq
DB search
MIGGPPCQAYSVVGRSRNLGKVNYRIEDDHRSSLYRQYLRIIAEHWPAVFVMENVKGMLS
AKLDGQPVFERILRDLERPRAAMGLSDRNDPRYRYRIEPIVASRSALIDIGLEPRDFIVE
CERYGIPQQRHRVILVGIREDLGDIALPRLQPSKAPTVAEVIGHMPRLRSGVSRTESANG
FAAVQDTAERWIATIRDQTLPETGPETRRWLRKLSNGEDAEVAERVEATVRYMTPSVLER
GGPFIECKPDLSRRDRLGRWLMDSRLGGVCNHESRLHLDRDLGRYLYAAAYAAVHGESPR
LNQFPRDLLPKHLNAETGDFDDRFRVQLADRPSTTITSHISKDGHYFIHFDPSQCRSLTV
REAARLQTFPDNYFFCGPRTHQYVQVGNAVPPLLAVQIAECVWKLLIDSGWAG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgatcggcggcccgccctgccaggcatattcggtggtggggcgttcgcggaacctggga
aaggtcaattatcggattgaagacgaccatcggtcatcgctgtaccggcagtacttgcga
attattgccgagcactggccggctgtgttcgtgatggagaacgtcaagggcatgctttcg
gcgaaactcgatggtcagccggttttcgagcggattctccgggatcttgagcgaccacgg
gccgcgatggggctttcggaccgcaatgatccgcggtatcggtaccggattgagccaatc
gtagcgtcccggtcggcgctgatcgacatcgggcttgagccaagagacttcatcgtcgag
tgcgaacgttacggaattccgcagcagcgccaccgcgtgattctggtgggaatccgtgaa
gacctgggggatattgctctacctcgtctgcagccgtcaaaggcaccgacggtggccgag
gtgattggccacatgccccgtctgcgcagcggcgtatcgcggaccgaatcagcaaatggc
tttgccgcggtccaagatacggctgagcggtggattgccacgattcgcgatcagacgttg
ccggagaccggtccagaaactcgccgctggctacggaaactttcgaacggcgaggacgcc
gaggtcgccgagagagttgaagcaaccgtgcgatacatgactccgtcagtcctcgaacgt
ggcggaccgtttattgaatgtaagccggatctttcacggcgcgaccgcctggggcgctgg
ctgatggatagccgccttggtggcgtgtgcaatcacgagagtcgattgcatctggatcga
gacttgggacggtacttgtatgcggcggcgtacgcggcagtccacggggaatcgcctcgt
ttgaatcagtttccacgggatctgctaccgaagcacctcaatgcggagaccggtgatttt
gatgacaggttccgggtccagctcgccgaccgcccgtcgacgacgattacatcacacatt
tcaaaagacgggcattatttcattcatttcgatccgtcacagtgccggagtctgactgta
cgcgaagccgcccgattacagacattcccggataactatttcttttgcggcccacgtacg
catcaatacgtccaagtcggcaacgctgtgccaccgctgctggcagtacaaatcgccgaa
tgcgtttggaagctcctgatcgactcaggctgggcaggataa
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