Planctoellipticum variicoloris: SH412_004959
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Entry
SH412_004959 CDS
T09866
Name
(GenBank) class I tRNA ligase family protein
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
pvar
Planctoellipticum variicoloris
Pathway
pvar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SH412_004959
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvar01007
]
SH412_004959
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvar03016
]
SH412_004959
03029 Mitochondrial biogenesis [BR:
pvar03029
]
SH412_004959
Enzymes [BR:
pvar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
SH412_004959
Amino acid related enzymes [BR:
pvar01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SH412_004959
Transfer RNA biogenesis [BR:
pvar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SH412_004959
Prokaryotic type
SH412_004959
Mitochondrial biogenesis [BR:
pvar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SH412_004959
BRITE hierarchy
Motif
Pfam:
tRNA-synt_1_2
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
WLD14766
LinkDB
All DBs
Position
complement(6352154..6355276)
Genome browser
AA seq
1040 aa
AA seq
DB search
MPRYDAKRIEAKWQAHWDEQQTFRTPEQSPASSTGKLYVLDMFPYPSSNGLHVGHPEGYT
ATDIVCRYSRMRGKHVLHPMGWDAFGLPAEEHAIKTGTHPRATTEANITNFRRQLKMLGF
SYDWNREIATTDVDYYRWTQWIFLQLFDTWYDADCIWTGPDGVQRTGRGRPISELPIPAE
VSAQGDEAVRRYQDSQRLAYQHEAPVNWCPALGTVLANEEVIDGKSERGSHPVERLPLRQ
WMLRITAYADRLGSELEDLNWPESIKSLQRNWIGRSEGAEVDFAIADDREGVESRELRVE
SQTEKSSSAKPEARSPKPAIRVYTTRPDTLFGVTYMVLSPEHPLVEQITTPAHRAAVEAY
RKQASLKSDLDRTDLAKDKSGEFTGAYAINPVNGDKVPVWIADYVLSSYGTGAIMAVPAH
DDRDFEFAKKFGLPIRAVVGPSDTWLRDQTDKFVNWMGDVGHVVESGAKQIRQWIGKLPL
SPVLKKGLEFADQAVGKAPSVDNLVEAVRHIYLHDANQFAAAFTDIGVAVNSGKYDGLPT
AEFKARITADLEASGQGKKAVNYRLRDWLFSRQRYWGEPFPLWHELDANGQPTGLMRTDA
EADLPVVLPEMADFKPTGTPEPLLSKAPEEWLYTTAPDGVRLKRETNSMPQWAGSCWYYL
RFCDPKNDAQFIDPELAKYWLPVDLYIGGAEHAVLHLLYSRFWHKVLFDRGYLEVPEPFG
RLVNQGMILGDLEFTAFKQVESRESRVESQSEEVAVWLSASEVTDGVHGPTKASVVAVKV
SADQVEKKGDSFVLKDHSSITVDARAFKMSKARGNVINPDDVVAQYGADALRLYEMFMGP
LEATKPWSMAGVEGIFRFLGRVWRLVVDDRADEVQLNETVRDVPPTPEQLRVLHRTIKAV
TEDIEKLSFNTAISRMMEFVNEFTSQDVRPQAILEPFLLLLSPFAPHLAEELWQLLGHEQ
TLAYEPWPSFDPALLEESTVEVPVQVNGKVRGKITVAKTADQAAVQAAAEADPAVAGNLA
GKTIVKVIYIAGRTLNFVVK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgccccgatacgacgccaagcggattgaagccaagtggcaggctcactgggacgagcag
cagacgttccgcacgcccgagcagtctcctgccagttccaccggcaagctgtacgtgctg
gacatgttcccgtacccgtcgagcaacgggctgcacgtcgggcacccggaaggctacacg
gcgaccgacatcgtctgccgctacagccggatgcgcggtaagcacgtgctgcacccgatg
ggctgggatgcgttcggtctgccggccgaagagcacgccatcaagaccggcacgcatccg
cgggcgacgaccgaagcgaacatcaccaacttccgccggcagctcaagatgctcggtttc
agctacgactggaaccgcgagatcgccacgaccgacgtcgattactatcgctggacgcag
tggatcttcctgcagctctttgatacctggtatgacgcggactgcatctggaccgggccg
gacggggtacagcggaccggccgcggccggccgatcagcgaactgccgatccccgcggaa
gtcagcgcccagggggacgaagccgtccggcggtatcaggacagccagcggctggcctat
cagcacgaagctccggtcaactggtgcccggctctcggcaccgtgctggccaatgaagaa
gtgatcgacggcaagagcgagcgaggcagccaccctgtcgaacgcctgccgctgcggcag
tggatgctccgcatcaccgcctacgccgaccggctggggagcgagctggaagatctgaac
tggcccgaatcgatcaagtcgctccagcggaactggatcggccggagcgaaggggcggaa
gtggacttcgcgatcgcggacgatcgcgaaggagtcgagagtcgagagttgagagttgag
agccagacagagaagtcctcgtctgcgaagcccgaagcccgaagcccgaagcccgccatc
cgcgtttacaccactcggccggacacgctgttcggcgtgacctacatggtgctgtcgccc
gagcatccgctcgtcgagcagatcacgacgccggcgcatcgggcggcggtggaggcttac
cgcaagcaggcgtcgctgaagagcgatctcgaccggaccgacctggccaaggacaagtcg
ggcgaattcaccggtgcatacgccatcaacccggtcaacggggacaaggttccggtctgg
atcgctgactatgtgctgagcagctacggcaccggcgccatcatggcggtcccggctcac
gacgaccgggatttcgagtttgccaagaagttcggcctgccgatccgggcggtggtcggg
cccagtgacacctggctccgcgaccagaccgacaagttcgtgaactggatgggggatgtc
ggtcatgtcgtcgagtcgggagcgaagcagatccgccaatggatcgggaagctgcctctc
tcgccggtcctcaagaagggactcgaatttgccgaccaggcggttgggaaggccccctca
gtcgacaatctcgtcgaggcggtccggcacatctatctgcacgacgccaatcagtttgcc
gcggcctttaccgacatcggcgtggcggtcaattccggcaagtacgacggtctgccgacg
gcggagttcaaggcccgcatcactgcggacctcgaagcgtcgggtcaggggaagaaagcg
gtcaactatcgactgcgcgactggctgttcagccggcagcggtactggggggagccgttc
ccgctgtggcacgagctcgatgcgaacggccagccgaccgggctgatgcggaccgacgcg
gaagccgacctgccggtcgtgcttcccgagatggccgacttcaagccgaccggcactccg
gaacccctcctttcgaaggcaccggaagagtggctctacacgaccgctccggacggcgtg
cgcctgaagcgcgagaccaacagcatgccgcaatgggcggggagctgctggtactacctc
cgcttctgcgatcccaagaacgacgcgcagttcatcgatccggagctggcgaagtactgg
ctgccggtggatctctacatcggcggagccgagcacgccgtgctgcacctgctctactcg
cggttctggcacaaggtgctatttgaccgaggatacctggaggtgccggagccgttcggt
cggctggtgaatcaggggatgattctgggagaccttgagttcacggcgttcaagcaagtc
gagagtcgagagtcgagagtcgagagccagtcagaagaagtggcggtctggctgtcggcc
tccgaagtcaccgatggcgtgcatgggccaaccaaagcgtccgttgtcgcggtgaaagtc
tcggccgaccaagtggagaagaagggggacagctttgtgctgaaggaccactcttcgatc
acggttgacgcccgtgcgttcaagatgtctaaggcccgcggcaacgtgatcaatcccgac
gatgtcgtcgcgcagtacggggcggatgcgctccggctgtacgagatgttcatggggccg
ctcgaagcgaccaagccctggagcatggcgggggtcgaagggatcttccggttcctcggt
cgcgtctggcggctggtggtggatgatcgggcggatgaggtgcagctcaacgagacggtc
cgcgatgttccgccgacgcccgagcagctccgcgtgctgcaccggacgatcaaggcggtg
accgaggacatcgaaaagctctcgttcaataccgcgatcagccggatgatggaattcgtc
aacgagttcaccagtcaggacgtccggccgcaggcgatcctcgaaccgttcctgctgctg
ctgagcccgttcgcgccgcacctggcggaagagctgtggcagctcctgggccacgagcag
acgctggcgtatgaaccgtggccgagcttcgatccggccctgctcgaagagtcgacggtc
gaggtgccggtgcaggtcaacggcaaggtccggggcaagatcaccgtcgccaagaccgcc
gatcaggcggcggtccaggcggcggcagaggccgacccggcggtggcggggaacctggcg
ggcaagacgatcgtcaaggtgatctacatcgccggccggacgctgaattttgtggtgaag
tag
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integrated database retrieval system
