Planctellipticum variicoloris: SH412_004972
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Entry
SH412_004972 CDS
T09866
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00300
Lysine biosynthesis
pvar00470
D-Amino acid metabolism
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
pvar01120
Microbial metabolism in diverse environments
pvar01230
Biosynthesis of amino acids
Module
pvar_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SH412_004972 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SH412_004972 (dapF)
Enzymes [BR:
pvar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SH412_004972 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
WLD14779
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All DBs
Position
6371137..6371979
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AA seq
280 aa
AA seq
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MRFTKMHGIGNDYVYVNAFEEKLPADIPALAIAVSDRHKGIGGDGLILIGPSEVADARMR
MFNADGSESEMCGNGVRCVAKYVYDHGIARKPELRIETGRGVLTLQMFPGSNGKIDRVRV
NMGPPILKFDQIPTTLPGQPPLNVPLEVGGKKFDVTCVSMGNPHCITFVDEVNDDWVLRV
GPLLEKHPAFPRRVNAEFIQVVSPDEFIMRVWERGSGETQACGTGACASAVAGILTGRTH
NRVLVHLPGGDLELEWAGGDSPVFMTGSATEVFTGEWLGG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaccaagatgcacggcatcggcaacgactatgtgtacgtcaatgccttcgag
gaaaagctgcccgcggacattcccgcgctggccatcgccgtcagcgaccggcacaaggga
atcggcggcgacgggctgattctgatcggcccgtcggaagtcgccgacgcccgcatgcga
atgttcaacgccgacggcagcgagtcggagatgtgcggcaacggcgtgcgctgcgtcgcg
aaatacgtctacgaccacggcatcgcccgcaagcccgaactgagaatcgaaaccgggcgg
ggggtgctgacgctgcagatgtttcccggttccaacggcaagatcgaccgggtgcgggtc
aacatggggccgccgattctgaagttcgaccagattccaacgacgctgccggggcagccg
ccgttgaacgtgccgctggaagtcggcggaaaaaagttcgacgtcacgtgcgtctcgatg
ggaaatccgcactgcatcacgttcgtggacgaggtcaacgacgactgggtgctgcgggtc
ggcccgctgctcgaaaagcacccggcgtttccgcggcgggtcaacgccgagttcatccaa
gtcgtctcgcccgacgagttcatcatgcgggtgtgggagcgggggagcggcgagacgcag
gcctgcggcaccggggcctgcgcatcggccgtcgcaggcattctgaccggtcgaacgcac
aaccgcgtgctggtgcatctgccggggggcgacctggaactggagtgggccggcggcgac
agcccggtgttcatgacggggtcggcgacagaggtgtttacgggcgagtggctggggggg
tga
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