KEGG   Planctellipticum variicoloris: SH412_005048
Entry
SH412_005048      CDS       T09866                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pvar  Planctellipticum variicoloris
Brite
KEGG Orthology (KO) [BR:pvar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pvar03000]
    SH412_005048
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvar02048]
    SH412_005048
Transcription factors [BR:pvar03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SH412_005048
Prokaryotic defense system [BR:pvar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    SH412_005048
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 HTH_19 MarR_2 HTH_24 HTH_37 Xre-like-HTH HTH_IclR HTH_35 HTH_60 DUF7343 HNF-1_N HTH_10 Dak2 DUF6695
Other DBs
NCBI-ProteinID: WLD14853
LinkDB
Position
complement(6482206..6482637)
AA seq 143 aa
MATGTTFSLKGKDRDSYLELVMAFPLASIQSEVHLAEAQQVMDRLLARGKLDHGEETYLD
ALSDLVATYEDAHHAISPASDADMLRHLLDARGITQAELSRETGLAKSSLSEVLAGKKAF
SRLMIRKLADFFGVDVSLLAANL
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcgaccggtacgacgttcagcctgaagggcaaggaccgggattcgtatctcgaactc
gtgatggcgtttccgctggcctcgatccagtccgaggtgcatctggcggaggcccagcag
gtcatggaccgcctgctcgcccgggggaagctcgatcacggcgaggagacctacctcgac
gcgctgagcgatctggtggcgacctacgaggacgcccaccatgccatcagcccggcctcg
gacgccgacatgttgcggcacctgctcgatgcccgggggatcacacaggcggagctcagc
cgggagacggggctggcgaagtcgtcgctgtcggaggttctggcggggaagaaggcgttc
agtcgtttgatgatccggaagctggctgactttttcggggtggatgtgagcctgctggcg
gcgaatctgtga

DBGET integrated database retrieval system