Planctellipticum variicoloris: SH412_005073
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Entry
SH412_005073 CDS
T09866
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
Organism
pvar
Planctellipticum variicoloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
IAT_beta
Pneumo_ncap
Motif
Other DBs
NCBI-ProteinID:
WLD14878
LinkDB
All DBs
Position
6510774..6518210
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AA seq
2478 aa
AA seq
DB search
MQRAKFSLASVLWLFAASAALAQTNDVSPNGAGVVSLEDNFSGTASLGQGAYIDVRNMAG
SGVGYRNGYTQVGGFIPLWGSDDWFIAPQARLIITDTQRIGGNLGLVGRRYVSDWDRIIG
ANLFYDFDESYLNNRYNQVGFGFETLGEWLDVRGNVYLPTGGETNNMGPAGLDSTLYYIQ
NRLAVRGYDLIEQSLKGGDVEFGVPVLPSTPWLRAFAGAYFYDGDGHDPVGVRGRIDANI
SNDLLVGLNVTHDNVYGTNLNAVVDFRFSGFLPTRYFPNWTTQERMLTQVQRNWRIATDQ
YLISKDIPVINPRDDQPYFVVHIDSNNTGAGTGDGTAENPYHNLPGTVPNQTDLVLVQRG
QSTEAAPYTGNIQLVDYARMLGEGKAHIFDGYVNYGGYSQVYNDTVLPGFSNSGLYPFLS
NPAGDIVTLASHNEVSAMVLQNASGAGIAGNGVSGFHLNNLEIAGNVGGGIVLQNAVGTG
GATLDGQTISGGLIADINRNVVPGYTPPAIGVGNNAGGGIVIDTGADGLNLDITRVSMNA
AAPGTQTVGIQLTADDGNLSVILDDVQTRGNSSAGIQLNQTGGTTLAATMTTVDVSANAG
DGLQINGDGGTTVVGTTLTPVNGLLADDNAGRGIAISGANAAQIGVALSGGSTQRSGDDG
LFITGAGAGTVVDVSVIGNNLTDSGQTVAGAAAVDLSALAGADVTLTMSNTPAGFTTNAN
DDSGLMVTANAGTATANVTNGNFNNAGVDAVSILGTALGTANVSLTGTGGSDAGNDGIHA
VADGGTVNLEVTGSSAVPASFNGAGVNGFDGLAQNGGTLNMCLEYTTFNGSGDVGMTLLA
DGVDAMTSSLISANLDNVQVNGSQLGGLAGTADNFGELRLRAVASQFDGNGLGAASDGVL
ITADNSGRALTLFSNSSASGNSDDGFSYVAGNGAYMSARLDAFTATGNAGYGVNFNATGA
GTDAYLITETASGANSVSGNTLGNYNLAFTNTGDAVAALTGSFNGSGGDGVNISITGDGT
GTALVSLTGDGTTDTIDGNAGNGVNISIQNEATAGVSVTGYTSISNNGADGIHVALQDIF
TAAAVDLRGIPTTLTTMTDNGDDGVEVDLTNVVLGLVGGAAGNVDVLSLTDNDPNNICLP
APALMALNTVVAAPTANGVLIDSYNINNTSPPNPGQDGIIVIGNAVSGTGGITISNNIDP
NMEDGIQVNLTNNSTPAFISIHDNQLSEMTQNGIIVTADGGSSVLDIFNNTVTTPGDTGI
AVELTNLANYNLGIDSNTVQGALLNEGIRLALDGGAQLSGVNSISDNAVSDGASDGVLVS
LDNATIAALQMLQNSVITNADNGLVIRGVNGSAITTVLIDGSEISDNRAGDGVLVDLTDS
GVTGGITISNSSISNNALNGINFELDNAPIASVDIIDNNVGQSFAAGTLDFSFNNLIWTT
LVDNNAGSTVDIASVSIDLTPTGQVWRPDLTPLVAQGFQPQGGSDVTVGLTAVNGTLVTA
GTDPLEDIFNNVIPGGGLATTDPFDQVITLDFNDFNPGEQLNYSLSHALPTTTTGSGLSG
VTLAGAIGTVTLADGRTVSGVLTSSGLDIVQSFAASSNGISNNGLDGVRVNQTNGSDIAN
LNIDGNVIAANGTNGVELLVSSSDLGATMVTENQIRDHANGDGFRMVGPSDTSNAIDLAF
ARNTIDSNTGGRGVNIDLTGSPNATNVTASFTNDSITNNGQEGINFNLANNGVASGTTGT
LTITSDNVTPNPVSGLTHSQINGNGGAGVLINTAGASSYTLNVGGTGTANEFSNNGGPGL
LLEMAGSGASTATIANSTFASNVDAGIGVRQTGSTSATINMTGLSLTGTTDGGDVDFAGE
GFKAILRSQSVLTGSLAGSTITGNAGDGVHLNATGNNAGVFSTITDFTIGGLTPDLGNTI
TGNGVGGVGNGISVLRTADAQIDLIGILNNTVTGNTGNGLYILAANANKIDDYTINSNSF
SSNARDGVLFDVRADAAIDANMDLNVISGNGLNGIHTIEQVNAGADLRSVDGTWTRNTIT
SNGQNGIFLEAAMGNYGGLLIGDLSDQLQGNAIGLNAASGVHITGPGTVTVGSNLIMENG
TLSELGTANEDAGVYINVRPFSDVTLVNNDIENNRGDGVQYGMQTGFSGFFSRVSITDNV
ISSNAGRGIDLINRASNVTNAEISGNRVNSNGLEGVYIINTASTTQNQFDSSNVALLTNG
SIFNNPILRLQFNGNEVRSNGINSPASTTGFWLRVGTSGGGSSSSTTPGSFVSDGGFGQN
ALSENALAGGVIASMYDNTFGGNFGNDIQFASFVSTGDPAATAGTWGDTQNPTVGPTTYQ
SDPLSRLDLYFDNNAYESQDVNNSSGISTANPTNVAFYDNSEGTFKSRLNTTNPGANQGP
FTSATRRRNATRLAGAFPDADSQPNGTSFLYPGVGASTFRVDTTDGSFFIDDTPFPYTGF
IWGGSITGEVPYSWGTLP
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgcgaaattcagtctggcaagtgttttgtggctgttcgcagcttcagcagcc
cttgcgcagacgaacgacgtgtccccgaatggcgcgggggtggtttcgctggaagacaat
ttcagcggcaccgcatccctcggccagggagcctacattgatgtccggaatatggccggc
agcggtgtcgggtaccgcaacggctatacgcaggtcggcggattcatcccgctctggggc
tccgatgactggttcatcgctcctcaggcgcggctgatcatcaccgacacgcaacgcatc
gggggcaacctcggtctcgtcggtcgccggtacgtcagcgactgggaccggatcatcggc
gccaacctcttctacgactttgacgagtcgtacctcaacaaccgctacaaccaggtcggt
ttcggcttcgaaaccctgggcgagtggctggacgtgcgagggaacgtctaccttccaacg
gggggcgagaccaacaacatgggccccgccggcctcgactccaccctctactacatccag
aaccgccttgcagttcgcggctacgacctcatcgaacagtccctcaaggggggcgacgtc
gaattcggcgtccccgtcctgccgagcaccccgtggcttcgggccttcgcgggagcctat
ttctacgacggcgacggacacgaccccgtcggcgtccgcggacgcattgacgcgaacatc
agcaacgacctgctcgtcggcctgaacgtcacccacgacaacgtctacggcacgaatctc
aatgccgtcgtcgacttccgcttctcaggcttcctgcccacccgctacttccccaactgg
accacccaggagcgcatgctgacccaggtgcagcgcaactggcgaatcgcgaccgaccaa
tacctcatctcgaaggatatcccggtcatcaatccgcgcgatgaccagccgtactttgtc
gtccatatcgacagcaacaacaccggagccggaaccggcgacgggaccgccgaaaacccg
taccacaacctgcccggcacggttcccaaccagaccgacctggtgcttgtccagcgcggt
cagtcgaccgaggcggcgccttacaccggcaacattcagctcgtcgactacgcccgcatg
ctcggcgaaggcaaagcccacatcttcgacggttacgtcaactacggcggctattcgcag
gtctacaacgacaccgtcctccccggattcagcaacagcggtctctatccgttcctgtcg
aatcccgccggcgatatcgtgactctcgccagccacaacgaagtctccgcgatggtcctc
cagaacgcctccggcgccggaatcgccggcaacggcgtcagcggcttccacctcaacaac
ctcgaaatcgccggcaacgtcggcggcggcatcgttctccagaacgccgtcggcaccggc
ggcgccaccctcgacggccagaccatctccggcggcctgatcgccgacatcaaccgcaac
gtcgtccctggctacactccccccgccatcggcgtcggcaacaacgctggcggcggcatc
gtgatcgacacgggcgccgacggcctcaacctcgacatcacccgcgtctcgatgaacgcg
gctgcgcccggcacgcagacggtcggcattcaactgacggccgacgacggcaacttgtcc
gttatcctggacgacgttcaaactcgcggcaattcgagtgccggcatccagctcaaccag
accggcggcacgactctcgcggcgaccatgaccacggtcgacgtctcggcgaacgccggc
gacggtttgcagatcaacggcgacggcggcaccaccgttgtcggcaccacgctgactccc
gtcaacgggctgctggccgacgacaacgcgggccgcggcatcgccatctccggggccaac
gccgcgcagatcggggtcgccctcagcggcggcagcacgcagcgctcgggcgacgacggg
ctgttcatcaccggcgccggcgcggggaccgtcgtcgatgtctcggtcatcggcaacaat
ctgaccgacagcggccagacggtcgccggcgcggccgcggtcgatctcagcgctctggcg
ggggcggacgtgacgctgaccatgagcaatacgccagcgggcttcaccacgaacgccaac
gacgattccgggctgatggtcacggccaacgcgggcaccgcgacggcgaacgtgaccaac
ggcaacttcaacaatgccggggtcgacgccgtcagtattctcggcacggccctgggaacc
gccaatgtcagtctgaccggcactggcggctccgacgcggggaacgacggcatccacgcc
gtggccgacggcggtacggtgaaccttgaggtcaccgggagcagcgcggttccggccagc
ttcaacggagccggcgttaacggcttcgacggcctcgcccagaacggcggcacgctcaac
atgtgcctggagtacacgacgttcaacggcagcggcgatgtcggcatgactctgctcgcc
gacggcgtcgacgccatgacgtcttcgctgatctccgccaatctcgacaacgtccaggtc
aacggcagccagctcggcgggctggcggggacggccgacaacttcggcgagctccgcctg
cgagcggtcgcttctcagttcgacggcaacggactcggcgcggcctccgacggcgtgctg
atcacggccgacaacagcggtcgggcgttgaccctgttctccaacagctccgccagcggg
aacagcgacgacggattcagctacgtcgccggcaacggcgcgtacatgtccgctcggctg
gatgcgttcaccgccaccggcaatgcggggtacggcgtgaacttcaacgcgaccggggcg
ggcaccgacgcctacctgattacggaaaccgccagcggcgcgaactcagtttccggaaat
acgctcggaaactacaaccttgcgttcacgaatacgggcgacgcggtggcggctctcacc
ggatcgtttaacggttcgggcggagacggcgtcaatatctccatcaccggcgacgggacc
ggcacggctctggtcagcctcaccggcgacgggacgacggatacgatcgacgggaacgcc
gggaacggcgtcaacatcagcattcagaacgaggcgacagccggcgtgagcgtgacgggt
tacacttcgatcagcaacaacggtgcggatggcattcacgtcgctctgcaggacatcttc
actgctgcggctgttgatctgcgtggaattccgacgacgctcacgacgatgaccgacaat
ggcgacgacggggtcgaggtcgatttgacgaacgtggttctggggctggtcggcggagcg
gccggcaacgtcgacgtcctcagcctgaccgacaacgatccgaacaacatctgcctgccg
gcgccggcgctgatggccctcaacaccgtggttgcggcgccgaccgccaacggggtgttg
attgacagctacaatatcaacaataccagcccccccaatccgggacaggacgggattatc
gtgatcggaaacgccgtcagcggcaccggcgggattacgatcagcaataacatcgatccg
aacatggaagacggcatccaggtcaacctgacgaacaactcgacgcccgccttcatctcg
attcacgacaaccagctcagcgaaatgacgcaaaacggcattatcgtgaccgcggacggg
ggatcgtcggtgctggacatcttcaacaacaccgtcacgactccgggagacacgggaatc
gccgtcgagttgaccaatctggcgaactacaacctggggatcgacagcaacacggtgcag
ggggcgttgctcaacgaggggattcggctcgcgctggatggcggtgctcaactcagcggc
gtgaactcgatcagcgacaacgccgtcagcgacggagcctcggacggcgtgctggtcagc
ctggacaatgcgacgatcgccgccctccagatgctgcagaactccgtgatcacgaatgcc
gacaacggcctggtcattcgcggagtcaacggctccgcgatcacgaccgtcttgatcgac
ggaagcgaaatttccgacaatcgggccggcgatggcgtgctggtcgatctgacggacagc
ggggtgaccggcggcatcacaatcagcaacagctccatttcgaacaacgccctcaacggg
atcaacttcgaactggacaacgcgccgatcgcatcggtggacattattgacaacaacgtc
ggccagagctttgcggctggaacgctcgacttcagcttcaacaatctgatctggacgacg
ctcgtcgacaacaacgccggatcgacggtcgacatcgcttcggtgtcgatcgacctgacg
ccgacggggcaggtctggcggccggacctgactccgctggtggcgcagggtttccagccg
cagggcggatccgacgtcacggtcggtctgactgcggtgaacgggacgctggtgacggcg
ggaaccgacccgctggaagacatcttcaacaatgtgattccgggaggcgggctggccacc
acggatccgttcgaccaggtcataacgctggatttcaacgatttcaatccgggcgaacag
ctcaactacagcctgtctcacgcgctcccgaccacgacgaccggcagcgggctgagcggc
gtcacgctcgccggagccatcgggacggtcacgctggccgatggacgaactgtgagcggg
gtgttgacgtcctcggggctcgatattgtgcagtctttcgcggcatcttcgaacggcatc
tcgaacaacggactggacggggtgcgggtgaatcagaccaacgggtctgacatcgccaac
ctgaatatcgacggaaacgtgatcgccgccaacggcacgaacggggtcgagctgctggtg
agtagcagcgacctcggggcgacgatggtgacggagaaccagatccgcgaccatgcgaac
ggcgacggattccgcatggtgggaccgagcgacaccagcaacgccattgacctggcgttc
gcccggaacacgatcgattcgaacaccggcgggcgcggcgtcaacatcgacctgaccgga
agtccgaacgcgaccaacgtcacggcctcgttcaccaacgactcgatcaccaacaacggt
caggaggggatcaacttcaatctggccaacaacggcgtggcatccggaacgaccggtacg
ctgacgattaccagcgacaatgtcacgccgaacccagtctctggcctcacgcacagccag
atcaacggtaatgggggagccggcgttctcatcaatactgccggcgccagcagctatacg
ctcaacgttggcgggacgggaacggcgaacgagttcagcaacaacggcggccccggcctg
ctgctggagatggctggcagcggggccagcaccgcgacgatcgccaactcaacgtttgca
tcgaacgtcgacgccggcatcggagtccgtcagaccggcagcaccagcgccacgatcaac
atgacgggactcagcctcactggaacgacggacggcggagacgtcgacttcgccggagaa
ggtttcaaagcgatccttcgcagccaaagcgtgctcaccggctctctcgccggctcgacg
atcacaggcaacgccggcgacggcgttcacctcaacgcgaccggcaacaatgcgggcgtt
ttctccacgatcacggacttcacgatcggcggcctgacccctgatctggggaatacaatc
accgggaacggagtgggcggggtcggcaacggcatcagcgtgctccgcaccgcggatgcc
cagatcgacctcattgggatcctgaacaacacggtgaccgggaataccggcaatggtttg
tacatcctggctgcgaacgccaataagatcgacgattacacaatcaactcgaacagcttc
tccagcaacgcgcgggacggcgtgctcttcgacgtgcgggctgatgccgcgatcgacgcg
aacatggatctgaacgtcatcagcggcaacggtctgaacggcattcatacgatcgagcag
gtcaacgccggcgccgacctgcgaagcgtggacggtacctggactcgcaataccatcacg
agcaacggccagaacggcatcttcctggaagccgcaatgggtaactatggcgggttgctg
atcggggatctgtcggatcagctgcagggtaacgccattggtctcaatgcggccagcggc
gtccatatcaccggtccgggaacggtgacggtcggcagcaacttgatcatggagaacggg
acgctctccgagctgggaacggcgaacgaggatgccggcgtctacatcaacgtgcgtccc
ttcagcgatgtgacgctggtcaacaacgatattgagaacaatcgcggtgatggcgtgcag
tacgggatgcagacgggcttttccggattcttctcaagggtctcaattactgacaacgtc
atcagtagcaatgccggtcgcgggattgacctgatcaaccgggccagcaatgtgaccaac
gccgagatctccggcaaccgggtgaattcgaacggcctggagggcgtgtacatcatcaac
acggcgtcgacgacgcagaaccagtttgattccagcaacgtggctctgctgaccaacggg
tcgattttcaacaacccgatcctgcgactgcagtttaacggcaacgaagtgcggtccaac
ggtatcaacagcccggcctcaacaaccggcttctggttgcgggttggtacgagtggcggc
ggcagcagcagttcgacaacacccggctcgtttgtcagcgacggtggattcggacagaac
gcactttcggagaacgccctggccggcggcgtgatcgcctcgatgtacgacaacacgttc
ggcggcaacttcggcaacgatattcagtttgcctcgttcgtctcgacgggcgatcctgcg
gccacggccggcacgtggggggacactcagaatccgacggtgggtccgacaacgtaccag
tctgatccgttgtcccggctcgatctgtacttcgacaacaatgcctatgagtcgcaggac
gtaaacaactcttcgggaatctcgacggccaacccgacgaacgtagcgttctacgacaat
tcggaaggaacgtttaagtcacgtctgaatacgactaatcccggagccaaccaggggccg
ttcacgtcggccacgcgtcgccgcaatgcgactcgcctggctggggccttcccggatgct
gacagccagccgaatggcacgtcgttcctgtatccgggcgtgggagcgagcacgttccgc
gtggatacgacagacggaagcttcttcatcgacgacacgccgttcccgtacacgggattc
atctggggcggctcgatcaccggcgaagttccttactcgtggggcacgctgccgtaa
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