Planctellipticum variicoloris: SH412_005118
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Entry
SH412_005118 CDS
T09866
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00730
Thiamine metabolism
pvar01100
Metabolic pathways
pvar01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SH412_005118 (thiC)
Enzymes [BR:
pvar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SH412_005118 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
IFNGR1_D2
Motif
Other DBs
NCBI-ProteinID:
WLD14923
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Position
6574058..6575902
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AA seq
614 aa
AA seq
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MMIDRPGSRGYQLPALGLNPSTTAQGTNPGSFALKPTILPGVAGARTFASPDTPGMPAPS
NQTAWDFLPEGWSTEELPSGVPVAAPGERVFAHADGAWRRVTFPAGFAPITQLESARLGI
VTPQMRRVAEREPHLTAEQVRDEVAAGRLVIPANTVHLGYRLDPMSIGRASKTKVNANMG
ASPVSSSTDEEVEKLQWAEKWGADTVMDLSTGGDLDACRQALIQNSTVPIGTVPIYSMII
GRKIEQLTPAMILETLEHQARQGVDYFTIHAGVLHEHLSFIRQRLIGIVSRGGSLLAKWM
IHHGQQNPMYEHWESICDVMRQYDVTFSIGDGLRPGGLADASDQAQLAELCTLGELTERA
WRKGVQVMVEGPGHVPFDQIEYNMKLQRQLCHGAPFYVLGPLVTDIFPGYDHITSCIGAT
AAAYHGAAMLCYVTPKEHLGLPKKDDVKQGCIAYKIAAHAADVALGIPGTRDRDDELTKA
RAALNWQKHFDLSFDPDTARAYHDEDLDVDTDFCAMCGHDWCSVRISKEIVEFTSGKDEN
YQWQRAKVSAALTPEQQEILAKRGVLSPEEIHKLASKTKKAVGAETGQKAVCHSDVVSDA
ETAQIVQIELTTKS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgatcgtccgggaagccgtggttaccagttgcctgctctggggctgaatccc
tcgaccaccgctcaggggaccaatcccggcagctttgccttgaagccgacgatcctcccg
ggagtcgcgggcgcccggacgttcgcgtccccggatacccccggcatgccggcgccgtcg
aatcagaccgcctgggattttctgcccgaaggctggtcaaccgaagaactgcccagtggc
gttcccgtcgcagcgccgggcgagcgcgtcttcgctcacgccgatggcgcctggcgacgg
gtcaccttcccggcaggtttcgcgccgatcacgcagctcgaatcggcccgtctcggaatc
gtcacgccccagatgcgacgtgtcgccgagcgcgagccgcatctgaccgccgagcaggtc
cgggacgaagtggccgcgggccggctggtgatcccggcgaacacggtccacctgggctat
cgccttgaccccatgtcgatcgggcgggcttcgaagaccaaggtcaacgccaacatgggc
gcctcgccggtctcgtcgagcaccgacgaagaggtcgaaaaactgcagtgggcggagaag
tggggcgcggacacggtcatggacctctcgaccggcggcgacctcgacgcctgccgacag
gccctcatccagaacagcaccgtccccatcggcaccgtgccgatctattcgatgatcatc
ggccggaagatcgagcagctcacccccgccatgatcctggagacgctggagcaccaggcc
cggcagggtgtcgactacttcacgattcacgccggcgtgctgcacgagcatctctcgttc
atccgccagcggttgatcggcatcgtcagccgagggggatcgctgctggcgaagtggatg
atccaccacggccagcagaacccgatgtacgagcactgggaaagcatctgcgacgtgatg
cgccagtacgacgtcacgttctcgatcggcgacggcctccggcccggcggactggccgac
gcctccgatcaggcccagctcgctgagctgtgcacgctgggagaactcaccgaacgggcc
tggcggaagggcgtgcaggtgatggtcgaagggccggggcacgtgccgttcgaccagatc
gaatacaacatgaagctccagcggcagctctgccacggcgccccgttctacgtcctcggc
ccgctggtgaccgacatcttccccggctacgaccacatcacgagctgcatcggcgcgacg
gccgccgcttaccatggcgcggcgatgctctgctacgtcacgcccaaggagcacctggga
ctccccaagaaggacgacgtcaagcagggttgcatcgcctacaagatcgccgcccatgcg
gccgacgtggcgctgggcatccccggcacgcgcgaccgggacgacgaactgaccaaggcg
cgggccgccctgaactggcagaagcacttcgacctgagcttcgacccggataccgcccgg
gcctatcacgacgaagatctcgacgtcgacaccgacttctgcgccatgtgcggccacgac
tggtgcagcgtgcggatcagcaaggagatcgtcgagttcacgtcgggcaaggacgagaac
taccagtggcagcgggcgaaagtttccgcggcattgacgccggaacagcaggaaatcctg
gccaagcgaggcgtcctcagtccggaggaaattcacaagctggccagcaaaacgaagaag
gcggtgggtgcggaaacgggacagaaggcggtctgccacagcgacgtggtcagcgacgcg
gaaacggcccagatcgtgcagatcgagctgacgacgaaatcgtaa
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