Planctellipticum variicoloris: SH412_005172
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Entry
SH412_005172 CDS
T09866
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00020
Citrate cycle (TCA cycle)
pvar00620
Pyruvate metabolism
pvar00720
Other carbon fixation pathways
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
pvar01120
Microbial metabolism in diverse environments
pvar01200
Carbon metabolism
Module
pvar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SH412_005172
00620 Pyruvate metabolism
SH412_005172
09102 Energy metabolism
00720 Other carbon fixation pathways
SH412_005172
Enzymes [BR:
pvar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SH412_005172
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
DUF6622
ACT_9
Motif
Other DBs
NCBI-ProteinID:
WLD14977
LinkDB
All DBs
Position
complement(6632037..6633461)
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AA seq
474 aa
AA seq
DB search
MTEFRTEHDSMGQVQVPAGAYYGAQTQRAVENFPVSGWALRPELIRAMGLVKWACGVANR
DLGKLTGTGKNPLNDAQVAQMLEAAREVAGGKFDGEFPIDVFQTGSGTSSNMNCNEVISN
RAIELAGGDRFQDKKPIHPNDHVNMGQSTNDTFPTAIHVAVAMSIQSRLIPALESFRDVL
REKALAWDKIIKIGRTHLADATPLRLGQEFGGFARQLELSVDRAHKALKPVLELPVGGTA
VGSGINTHPEFAGRVCKALADETQLGFFEAENHFEGNAQRDGLVECHGQLRTIAVTLFNV
ANNIRWLSSGPRCGFFEIKLPDRQPGSSIMPGKVNPVMCESLMQVAARVMGNDQTVSFSG
ATGGQFQLNIMMPVMGHASLESVALLAQGTQAFVDLCAREMEANPEACEASVEQSLAMVT
SLNPYIGYEKAAALAKEAFKTGKTIRELCREQNILPDDELAKALDPWSMTEPQA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtttcgcaccgaacacgattcaatgggccaggttcaggttcccgccggcgcc
tactacggcgcccagacgcaacgggccgtcgaaaactttcccgtctccggctgggcgttg
cgaccggagctgattcgggcgatggggctcgtgaaatgggcctgcggcgtcgccaaccgg
gacctgggaaaactgaccgggaccggcaagaacccgctcaacgacgcccaggtcgcgcag
atgctcgaagccgcccgggaagtcgccggcggaaagttcgacggcgagtttccgatcgac
gtctttcagacggggtcgggcaccagcagcaatatgaactgcaacgaagtgatctcgaac
cgggcgatcgagttggccggcggagaccgctttcaggacaaaaagccgattcaccccaac
gatcacgtcaacatggggcagagtacgaacgacacgttcccgacggcgattcatgtcgcc
gtcgcgatgtcgattcagagccggctgattccggccctcgaatccttccgcgacgtgctg
cgggagaaggccctggcctgggacaagatcatcaagatcggccggacgcatctggccgac
gctacgccgctccggctcgggcaggagttcgggggcttcgcacgtcagcttgagctgtcg
gtcgaccgcgcccacaaagcgctcaagccggtgctggaattgccggtgggcggaacggcc
gtggggtcgggaatcaatacgcatccggagtttgcgggacgggtctgcaaagccctggcg
gacgaaacgcagttggggtttttcgaagccgagaaccacttcgaagggaacgcccagcgg
gacgggctggtggaatgccacgggcagttgcggacgatcgccgtgacgctgttcaacgtg
gcgaacaacatccgctggctgtcgtccgggccgcgctgcggattcttcgaaatcaagctg
ccggaccggcagcccgggagctcgatcatgcccgggaaagtgaacccggtgatgtgcgag
agtctgatgcaggtggcggcgcgcgtgatggggaacgaccagacggtctccttcagcggt
gcaacggggggacagttccagcttaacatcatgatgccggtgatggggcacgcctcgctc
gaaagcgtggcgctgctggcccaggggacgcaggccttcgtcgacctgtgcgcccgcgag
atggaagcaaacccggaagcctgcgaggcctcggtcgagcagagtctggcgatggtgacc
agcctgaacccgtacatcggttacgaaaaggccgccgccctcgccaaagaagctttcaag
acgggtaagaccatccgcgaactgtgccgggaacagaacattcttccggacgacgaactg
gcgaaagcgctcgatccctggagcatgaccgaaccgcaggcatag
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