Planctellipticum variicoloris: SH412_005284
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Entry
SH412_005284 CDS
T09866
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar02024
Quorum sensing
pvar03060
Protein export
pvar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SH412_005284 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SH412_005284 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SH412_005284 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvar02044
]
SH412_005284 (ffh)
Enzymes [BR:
pvar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SH412_005284 (ffh)
Secretion system [BR:
pvar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SH412_005284 (ffh)
Eukaryotic Sec-SRP protein
SH412_005284 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_33
AAA_31
AAA_18
Thymidylate_kin
APS_kinase
NTPase_1
ATP_bind_1
cobW
MeaB
AAA_30
Fer4_NifH
AAA_17
CTP_transf_1
TrwB_AAD_bind
6PF2K
AAA_24
ResIII
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
WLD15086
LinkDB
All DBs
Position
complement(6785075..6786559)
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AA seq
494 aa
AA seq
DB search
MFESITTSLKSALSVLGRGGKLTEANVRDGLAQVKRALLEADVHYDVATGFIKRVTEQAL
GEQVLKSLRPDQQIVGIVHQELVNLMGPTDNSLHLRRDSLNRIMMCGLQGSGKTTTCGKL
ARMLKESGHKAMLVAADLQRPAAIEQLKVIGAQLGVPVYSEPPQGTTPLKVCTNALAAAK
QAGDISVIIFDTAGRLHVDADLMQELELIDRKVQPDQILLVCDAMTGQDAVNSAKAFNDA
LELDGVILTKLDGDTRGGAALSVREVTGVPIKFIGVGEQLDRLEPFHADRMAGRILGMGD
VVTLFERAQQAVSQEEVESAQKKMAAGKFSLEDFRTQMQWIRRLGSLKDIMKMIPGVGGM
MDQLPEMADPEKDMGRIEAIISSMTKEERLNPDRIDRSRRHRIARGSGTDPADVSRILKD
FGAMSGMMQKMSGLGMMDRMKAMSQLGQAGMFNPGANLKQQKERSKRGPADQKLADEKRK
KARKESKKQKKRNR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaagcatcaccaccagcctgaagtctgcgctctcggtgttgggtcgcggcggg
aaactgaccgaagccaacgtccgggatggtctcgcgcaggtcaagcgggcgctgctcgaa
gccgacgtccactacgacgtcgccaccggtttcatcaaacgggtgaccgagcaggcgctg
ggtgagcaggttctcaagtctctccgtcccgatcagcagatcgtgggcatcgtccatcag
gagctcgtcaacctgatgggcccgacggacaactcgctgcatctgcggcgggactccctc
aaccgcatcatgatgtgcggcctccagggctccggcaaaacgacgacctgcggcaagctg
gcccgcatgctcaaagagagcggccacaaagccatgctggtcgcagccgacctccagcgc
cccgccgccatcgaacagctcaaagtcatcggcgcgcagctcggcgtccccgtctacagc
gagcccccgcagggaacgacgcccctcaaagtctgtaccaacgccctggccgctgcgaag
caggctggcgatatcagcgtcatcatcttcgacaccgccggccgactccacgtcgacgcc
gacctgatgcaggagctcgagctgatcgaccgcaaggtccagcccgatcagatcctcctg
gtctgcgacgccatgaccggccaggacgccgtcaacagcgccaaggccttcaacgacgcc
ctcgaactcgacggcgtgatcctcaccaagctcgacggcgacacccgcggcggcgccgcc
ctctcggtccgcgaagtcaccggcgtccccatcaagttcatcggcgtcggcgaacagctc
gaccgcctggaaccgttccacgccgaccgcatggcgggacgcatcctggggatgggcgac
gtcgtcaccctcttcgaacgggcccagcaggcggtttcgcaggaagaagtcgagtcggcc
cagaagaagatggcggccggcaagttcagcctggaggacttccggacgcagatgcagtgg
atccgccggctgggatcgctcaaggacatcatgaagatgatcccgggcgtcggcggcatg
atggatcagcttcccgagatggccgatcccgaaaaggacatgggccggatcgaggcgatc
atcagctcgatgacgaaggaagagcggctcaaccccgaccggatcgaccggagccgtcgg
caccgcatcgcccgcggcagcggcaccgatcccgcggatgtcagccggattctcaaagac
ttcggcgcgatgtccggcatgatgcagaagatgtcgggtctggggatgatggaccgcatg
aaggccatgagccagctcggccaggccggcatgttcaatcccggcgccaacctgaagcag
cagaaggagcggagcaagcgcggtcccgccgaccagaaactggccgacgagaagcgcaag
aaggcccgcaaggaatccaagaagcagaagaagcggaaccggtag
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