Planctellipticum variicoloris: SH412_005348
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Entry
SH412_005348 CDS
T09866
Name
(GenBank) alpha-amylase family glycosyl hydrolase
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar00500
Starch and sucrose metabolism
pvar01100
Metabolic pathways
pvar01110
Biosynthesis of secondary metabolites
Module
pvar_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
pvar_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SH412_005348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvar04147
]
SH412_005348
Enzymes [BR:
pvar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
SH412_005348
Exosome [BR:
pvar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SH412_005348
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
GLGE_C
AMPK1_CBM
GlgB_N
DUF5696
DUF3459
CBM53
Motif
Other DBs
NCBI-ProteinID:
WLD15145
LinkDB
All DBs
Position
complement(6874995..6876842)
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AA seq
615 aa
AA seq
DB search
MPTLPAEQVRGGMGSLPYEGGVAFRVWAPHADAVYVTGSFNDWSPDAHPMVKEEEGYWYS
DIASAAIGNEYKYRIINGGRELLRMDPYARQVISSVGNAVVYDPQFDWAGDDFHLPAVNE
LVIYELHLGTFHDQEDGTSDKFAEAVKKLDHLQRLGVNVIEVMPLAQFPGYSSWGYNPSC
VFAVETNYGGPVGFKRFVKAVHQAGMAVVLDVVYNHFGPSDLDLWQFDGWSENGQGGIYF
YNDWHAETPWGATRPDYGRKEVRQFIRDNALMWLEEYHVDGLRMDMTLFMHNVRGNGDPG
GDLPDGWSLIQWINRDIQQKYPGRITIAEDMQTDDRLTKPADQGGAGFTAQWGARFVHPV
RAAVIAASDEQRSLDSVRQALEGGYNGNPFQRVIYSESHDEVANGQSRVASEIDPQNPAS
WFAQKRTTLAAALVLTAPGIPMLFQGQEFLEDGWFEDSVPLDWHKSEEFSGLVRMYRDLI
HLRLNRFGTTRGLTGSGLNTFHENQADNVIAYHRWHQGGPADDVVVVVNLSHVAHCNYAI
GFPAPGIWRLRLNSDWSGYSRGFGNQQCSDVAAGIEPGGESQGPGAGKRDGFPAGGTISI
GPYSVVMFSQDKPGE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcccactctaccagccgagcaggttcgtggcggaatgggatcgcttccgtacgagggc
ggcgtcgcgtttcgcgtctgggcgcctcacgccgacgcggtgtacgtcacgggctctttc
aatgactggtcgcccgatgcgcacccgatggtcaaggaggaagagggttactggtactca
gacattgcctcggccgccatcggcaacgagtacaagtatcggatcatcaatggcggcagg
gaactgctgcggatggacccctatgcgcggcaggtcatcagttcggtcgggaatgccgtc
gtctacgacccgcagtttgactgggccggcgacgatttccatctcccggcagtcaacgaa
ctcgtgatctatgagctgcacctggggacgttccacgaccaggaagacgggacgtcggac
aagtttgcagaagccgtcaagaagctcgaccatctgcagcgactcggcgtgaacgtcatc
gaagtgatgccactggcccagtttcccggctactcgtcgtggggctacaacccctcgtgc
gtctttgccgtggaaaccaattacggcggtcccgtcggcttcaagcgttttgtcaaggcg
gttcatcaggccggcatggcggtggtgctggatgtcgtctacaaccacttcggtccgagc
gacctggatctgtggcagttcgacggctggagcgaaaacggacagggcggcatctacttc
tataacgactggcacgccgagaccccgtggggagcgacgcgccccgactacggccgcaag
gaagtccgccagttcatccgcgacaacgccctgatgtggctggaggaatatcacgtcgac
ggcctgcggatggacatgactctgttcatgcacaacgtgcggggtaacggcgatccgggc
ggcgacctccccgacggctggagcctgatccaatggatcaatcgcgacatccagcagaag
tacccgggacgcatcaccattgccgaggacatgcagaccgacgaccggctgacgaagccg
gccgaccaggggggagcgggtttcacggctcaatggggcgcccgtttcgtgcatcctgtc
agggccgccgtcatcgcggccagcgacgagcagcggtcgctcgacagcgttcgccaggcg
ctcgaaggcggttacaacggaaaccccttccagcgcgtcatctacagcgaatcgcacgac
gaagtggcgaacgggcaatcccgcgtcgcctcagaaattgatccgcagaatcccgctagc
tggttcgcccagaaacgcacgacgctcgcggccgccctcgtgctgaccgcgcccggcatc
ccgatgctgttccagggacaggagttcctcgaagacggctggttcgaggattcggttccg
ctcgactggcacaagtcggaggaattcagcggcctggtgcggatgtatcgagacctgatt
catctgcgtctcaaccggttcggcacaacgcgcggactgacgggctccggactgaatacc
ttccacgagaatcaggcggacaacgtcatcgcctatcaccgctggcaccagggcggcccc
gccgacgacgtggtggtcgtcgtgaatctctcccatgtggcccactgcaactacgcgatc
ggtttccccgcccctggaatctggcgactgcggctcaacagcgactggagcggctatagc
cgcggctttggaaaccagcaatgctccgacgtggccgctggaattgagcctggaggcgaa
tcgcaggggcccggcgccgggaagcgagatggctttccagccggcggaacgatcagcatc
ggaccgtacagcgtcgtgatgttttcgcaggacaagcccggcgagtag
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