Pseudoalteromonas viridis: J5X90_00205
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Entry
J5X90_00205 CDS
T07232
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvb03016
]
J5X90_00205 (truA)
Enzymes [BR:
pvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
J5X90_00205 (truA)
Transfer RNA biogenesis [BR:
pvb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5X90_00205 (truA)
Prokaryotic type
J5X90_00205 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QTL35538
UniProt:
A0ABX7VA62
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All DBs
Position
1:complement(43927..44724)
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AA seq
265 aa
AA seq
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MRVALGIEYNGGNYSGWQRQCNVNSVQEELETALSSICNHKVDVVCAGRTDAGVHATGQV
IHFDTHSDRDMKAFTLGVNSQLPDDIAVRYATPVHDEFSARFSATARRYRYVIYNSVNRP
GILRSGVTHYYHPLDAELMQAACPVMIGEHDFSSFRAVHCQSNSPCRNIHHLQVDRFGDY
IVIDVKANAFLHHMVRNITGCLMDIGVGKYPPEWMAELLSIKDRTQASATAKPNGLYLVD
VDYPERWQIPSTPAGPLFLPEVTIR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagctttggggattgaatacaatggcggtaattacagtggctggcagcgtcag
tgtaatgtaaacagtgttcaggaagagctggaaacagccttgtccagcatttgtaatcac
aaggttgatgtggtttgtgccgggcgcacagatgccggtgtgcatgccacaggtcaggtg
atccacttcgatacccattccgatcgggacatgaaagcctttacactgggcgtcaactct
cagctgcctgatgatattgctgtgcgctacgcaacgccggttcatgatgaattcagcgcg
cgcttcagtgcaacggccaggcgctatcgctatgtgatctacaacagtgtcaatcgtccg
ggcatcttgcgcagcggggtgacccattactatcatccactggatgccgagctgatgcag
gctgcgtgtccggtgatgataggtgaacatgatttctcttcttttcgcgcagtacactgc
cagtctaattcgccgtgtcgtaatatccatcatttacaggtcgaccgctttggtgactac
attgtcattgatgtgaaggccaacgcatttttacaccacatggtgcgcaacattaccggc
tgtttaatggacatcggggtgggtaaatatccgccggagtggatggctgaattgctgagt
attaaagaccgcactcaggcaagcgcaaccgccaaacctaatgggctatatctggtggat
gtagactacccagagcgctggcagatcccgtcaacgccagcgggacctttgtttttaccc
gaagtgacgatccgctaa
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