Pseudoalteromonas viridis: J5X90_00305
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Entry
J5X90_00305 CDS
T07232
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03030
DNA replication
pvb03430
Mismatch repair
pvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5X90_00305 (dnaQ)
03430 Mismatch repair
J5X90_00305 (dnaQ)
03440 Homologous recombination
J5X90_00305 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvb03032
]
J5X90_00305 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_00305 (dnaQ)
Enzymes [BR:
pvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5X90_00305 (dnaQ)
DNA replication proteins [BR:
pvb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5X90_00305 (dnaQ)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5X90_00305 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
QTL35551
LinkDB
All DBs
Position
1:complement(67659..68369)
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AA seq
236 aa
AA seq
DB search
MHKRQIVLDTETTGIDPKEGHRIIEIGCVELVNRRLTGNNFHVYINPQRGIEEEAIDVHG
ITNEFLRDKPFFHQIAQEFYDYIQGAELVIHNAPFDVGFMDHEFAMLNQGFAKTHDVCEV
LDTLVMARDLHPGQKNSLDALCRRYDIDNSKRTLHGALLDSEILSDVYLAMTGGQKKLNL
AQHNEQAQQGSGGEIRRLSAERAPLKVVMATADELDAHEARMELVNKASGQSLWQQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaagacaaatagtactggatacagaaaccacgggcatcgaccccaaagaaggt
cacaggatcattgagatcggttgtgtggagttagtgaatcgtcgtctgaccggcaataat
tttcacgtatatatcaacccgcaacgtggcattgaagaagaagccatagacgttcacggt
attaccaacgagtttttgcgagataaaccgtttttccatcagatagcccaggagttctat
gactatatacagggcgctgagctggtgatccacaatgccccgttcgacgtcggctttatg
gaccacgagtttgctatgctgaaccaggggtttgcaaaaacccatgatgtatgtgaagtc
ttagatacgctggttatggcgcgcgacttgcatccgggtcagaagaacagccttgatgcc
ttgtgtcgccgttatgatatagataactctaagcgtacgctgcacggcgcattgctggat
tccgagatcctgtcggatgtttatctggctatgacgggcggccagaagaagctcaatttg
gcgcaacataatgagcaggctcagcagggcagtggcggtgaaattcgtcggttaagtgcc
gagcgagcgccgttaaaagtggtgatggcgactgccgatgagctggacgcccatgaagcg
cgtatggaactggtcaacaaagccagtggccagagtttgtggcagcaataa
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