Pseudoalteromonas viridis: J5X90_00310
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Entry
J5X90_00310 CDS
T07232
Symbol
rnhA
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5X90_00310 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvb03032
]
J5X90_00310 (rnhA)
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
J5X90_00310 (rnhA)
DNA replication proteins [BR:
pvb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
J5X90_00310 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
J5X90_00310 (rnhA)
Elongation factors (archaeal)
J5X90_00310 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
Motif
Other DBs
NCBI-ProteinID:
QTL35552
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All DBs
Position
1:68439..68906
Genome browser
AA seq
155 aa
AA seq
DB search
MQKSVEIYTDGSCLGNPGPGGYGVYLSYQGHEKTLSAGYRLTTNNRMEMLAAIVALETLK
RPCQVILYTDSQYVKQGIESWLANWKKRNWKTAAKKPVKNVDLWQRLDAAVQRHTIEWRW
VKGHAGNKYNELVDDLARDAAGGSDLLEDTGYQSE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaaatccgtagagatctataccgacggttcctgcttaggcaatccgggacccggc
ggctatggtgtgtacctcagttatcagggtcatgaaaaaaccctcagcgccggatatcgg
ctcaccactaataaccgcatggagatgctggcagccattgttgcactcgaaaccctcaag
cgcccctgccaggttattttgtataccgacagccagtatgtgaaacagggtattgagtcc
tggctggcaaactggaaaaagcgtaactggaaaacagccgcgaaaaagccggttaaaaat
gtcgacttatggcagcgcctggatgccgcggtacagcgccataccattgagtggcgctgg
gtaaagggacatgctggtaataagtacaatgaactggttgatgatctggcccgcgacgcc
gctggtggcagcgaccttttagaagatacaggctaccagagcgaatag
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