Pseudoalteromonas viridis: J5X90_00465
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Entry
J5X90_00465 CDS
T07232
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00260
Glycine, serine and threonine metabolism
pvb00460
Cyanoamino acid metabolism
pvb00630
Glyoxylate and dicarboxylate metabolism
pvb00670
One carbon pool by folate
pvb00680
Methane metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01200
Carbon metabolism
pvb01230
Biosynthesis of amino acids
pvb01240
Biosynthesis of cofactors
pvb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J5X90_00465
09102 Energy metabolism
00680 Methane metabolism
J5X90_00465
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J5X90_00465
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
J5X90_00465
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
J5X90_00465
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
J5X90_00465
Enzymes [BR:
pvb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
J5X90_00465
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
SapB_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QTL35580
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Position
1:complement(99355..100611)
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AA seq
418 aa
AA seq
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MLERNMNIADFDPELAQAIQSETTRQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRACELFGCDYANVQPHAGSQANAAVFQALLQPHDTVLGMS
LAHGGHLTHGSHVNFSGKTYNAIQYGLNEETGEIDYAQVEALALEHKPKMIIGGFSAYSG
IVDWAKFREIADKVGAYLLVDMAHVAGLVAAGIYPSPIPHAHVVTTTTHKTLAGPRGGLI
LSACGDADIYKKLNSAVFPGGQGGPLCHVIAAKAVAFKEALQDDFKAYQTQVVKNAQAMV
AVLQERGYKVVSGKTDNHLFLLDLIDKDITGKDADAALGRANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEAEASELAGWICDVLDNIEDESVQAQVKEKVKAICAKLPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgtaacatgaatattgcagattttgaccctgaactagctcaagcgatccag
tcggaaacaacccgtcaggaagagcacatcgagcttatcgcatctgaaaactactgtagc
ccgcgtgtactagaggctcaggggtcgcagttaactaacaaatatgctgaaggttatccg
ggtaagcgctactacggtggctgtgagcacgttgacgtggttgagcaactggcgattgac
cgtgcctgtgaactgtttggttgtgactacgccaacgttcagccacacgcaggttctcag
gcaaatgccgcggttttccaggcactgcttcagccgcacgacaccgttctgggtatgagc
ctggcacacggcggtcacctgacacacggctctcacgtgaacttctcaggtaaaacttac
aatgcgattcagtacggtctgaatgaagagactggtgaaattgactacgcgcaggtagaa
gcgctggcattagagcacaagccaaaaatgatcatcggtggtttctcggcttactcaggt
attgttgactgggctaagttccgcgaaattgcagacaaagtaggtgcttacctgctggtt
gatatggcacacgttgctggtttggttgcggcaggtatctacccaagcccaatcccacac
gcacacgttgtgactacgacgactcacaaaaccctggcgggtcctcgtggtggtctgatc
ctgtctgcatgtggcgacgccgacatctataaaaagcttaacagcgcggttttcccgggc
ggtcagggtggtcctctgtgtcacgtgattgcagccaaagccgttgctttcaaagaagcg
ttacaggacgacttcaaagcttaccagacgcaagtggttaaaaacgcccaagctatggtg
gctgtacttcaggagcgtggctacaaagtggtttctggtaagactgacaaccacctgttc
ctgctggatttgattgacaaagacatcacaggtaaagatgccgatgcagcacttggccgt
gccaacatcacggttaacaagaactcagtacctaacgatccgcgttctccgttcgttact
tcaggtctgcgcattggttcaccggcaattacccgtcgtggctttaaagaagctgaagca
agcgagctggcaggctggatctgtgatgtactggacaacatcgaagacgagtcagttcag
gcacaagtgaaagaaaaagtaaaagcaatctgcgctaaactgcctgtatacgcataa
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