Pseudoalteromonas viridis: J5X90_02480
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Entry
J5X90_02480 CDS
T07232
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvb03016
]
J5X90_02480
Enzymes [BR:
pvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J5X90_02480
Transfer RNA biogenesis [BR:
pvb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5X90_02480
Prokaryotic type
J5X90_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QTL35944
LinkDB
All DBs
Position
1:complement(573852..574916)
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AA seq
354 aa
AA seq
DB search
MKTSVSDLNYLYGEPLARAEFKSQPEDFMVDEILDIDFTGEGEHVCLQIVKKGENTAFIA
RKLAAFAGVAPRDVSYGGLKDRHGVCTQWFSVPVPIKQELDFSTLNCDSLFVLKQVRHNR
KLRTGCHKGNRFTITLRNVSEPLDLLSRVNAVRQGVPNYFGEQRFGHDGYNLEMAQRLFD
GERIRDKKLRGLVISAARSHIFNQLVSRRVAEHGLAKTWHREVFMLSGSNAFFEEDISDE
LIVRLLEADIVLSAPMLGKGEKGLTALEIEWLKPFADWWQGLGALGLKNERRALRVIPEN
LTVKTLDATTVQLSFDLPKGCYATAILRELVHHEDVSHRNYDKKGSNQDEDPAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacctctgtatctgatctgaattacctctatggtgaacctttagcgcgggctgag
tttaagtctcagccggaagactttatggtcgacgagatcctcgacattgactttaccggc
gaaggcgaacacgtttgcctgcagatagttaaaaaaggcgaaaacaccgcttttatcgcc
cgtaagctggccgcgtttgccggcgtcgcgcccagggatgtcagctacggcggactgaaa
gaccgtcacggtgtgtgtacacagtggtttagtgttccggtgccaatcaagcaggagctt
gatttcagcacgctcaactgcgatagcctgtttgtgctaaagcaggttcgtcacaaccga
aaactacgcaccgggtgtcacaaaggtaatcgttttaccattacattacgtaatgtcagt
gaaccgctggatctgctgtcacgagtgaatgccgtgcgtcagggcgtgcccaactatttt
ggtgagcaacgctttggacatgatggctataacctggaaatggcgcaaaggctgtttgat
ggagagcggatccgtgataaaaaactacgaggtctggttatttcggctgcacgctcgcac
atttttaatcagctggtttcaaggcgggttgctgaacacggcctggcaaaaacctggcat
cgcgaagtctttatgctcagtggcagcaacgcattttttgaagaagacatcagtgacgag
ctaatagtccggctgctcgaggcagacattgtattatcggcgccgatgcttggcaaaggc
gaaaaaggcctcactgcgcttgaaatagagtggctcaaaccctttgccgactggtggcag
gggctgggtgcgctggggcttaaaaacgagcgccgagcactcagagtgatccccgaaaac
ctgacggtgaaaacactcgacgcgaccacagtgcagcttagttttgatttaccaaaaggg
tgctatgccaccgcgatactgcgtgagctggtgcatcatgaagatgtcagccatcgcaat
tatgataaaaaaggaagcaatcaagatgaagatcctgctcagtaa
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