Pseudoalteromonas viridis: J5X90_03485
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Entry
J5X90_03485 CDS
T07232
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00470
D-Amino acid metabolism
pvb00550
Peptidoglycan biosynthesis
pvb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5X90_03485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5X90_03485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvb01011
]
J5X90_03485 (murD)
Enzymes [BR:
pvb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
J5X90_03485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pvb01011
]
Precursor biosynthesis
Amino acid ligase
J5X90_03485 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
Motif
Other DBs
NCBI-ProteinID:
QTL36124
LinkDB
All DBs
Position
1:complement(793366..794691)
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AA seq
441 aa
AA seq
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MGYLDTLKNKHITVLGLGVTGLGIVRFLVRHGITPKVVDSRPVPSGADWMNHNLPECEAV
FGPLAEAALSATDLVVISPGVPLYETCVAQAIAAGVEVIGDVELFARLNDKPVIAVTGSN
GKSTVVSLAAEVCQQAGLKVGLGGNIGTSVLDLLERDFDVFVLELSSFQLETTHSLHCLS
AMILNITEDHMDRYPDFAAYCEAKLRIYQQVDCLVYNADDPRTFLPHDNALSVALEGATC
SLTEDKGQTYFSLHGNKLCPVDVLAMPGKHNQFNALAVMALLSPLALPDSAFIAAFEAFK
GLPHRCQLVADVQGVRYFNDSKATNVGATVAALESLAGEQGQILLIVGGDAKGADLSPLK
APLQRYCKTVFCFGKDGADFMPLHPHSQMVNNLSEAVALAAQQAKPGDLVLLAPACASID
MYANYMARGEEFCRLVEGQIC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttagacaccttaaaaaataaacacattaccgtgctcggactgggtgtcacc
ggtttgggcatagtgcgttttttggtacgccatggcattacgcctaaggtggtcgactct
cgccctgtgccttctggtgccgactggatgaatcacaacttacctgaatgtgaggcggtg
tttggcccacttgcagaggcggcactgagtgcaaccgacttggtggtgatcagtcccggt
gtgcctttgtatgagacctgtgttgctcaggcaatcgcagctggggttgaagtcattggt
gacgtcgaattgtttgctcgtctgaatgacaaaccagtgatcgctgtaaccggttcaaac
ggtaaatcaaccgtggtgagcctggcggcagaggtctgtcagcaggcaggtttaaaggtt
gggctgggtggtaacattggcacgtctgtgttggatctgctggagcgagactttgatgtg
tttgtgctggagctgtcgagttttcagctcgaaaccacgcacagtttgcactgtttgagt
gccatgatcctcaatatcaccgaagatcacatggacaggtatccggattttgccgcctac
tgcgaagcaaaattacgcatttatcagcaggtcgattgcctggtgtataacgccgacgat
ccgcgtaccttcctgccgcatgataacgcgctcagtgtggcgcttgaaggcgcgacttgc
agcttaacagaagacaaggggcagacctatttttcgctgcatggcaataagttgtgtccg
gtcgatgtgctggccatgccgggtaaacacaaccagtttaacgcactggcggtgatggcg
ctgttgtcgccgctggctttgccagacagcgcttttattgcggcgtttgaggcgttcaaa
gggttaccgcaccgctgtcagctggttgctgatgtgcagggagtgcgttatttcaatgac
tccaaagcaaccaatgttggcgcgacggtggcggcgctggaaagcctggccggagaacaa
ggccagatcttattgatcgtgggcggcgatgccaaaggggccgacttgtcgccactcaaa
gcgccgttacagcgttattgtaaaaccgtattctgctttggtaaggatggcgccgatttt
atgccgttgcatccgcacagccagatggtcaacaatttgagtgaggccgttgcgctggct
gcgcagcaggctaagcctggcgatctggtgctgctggcgccggcttgtgcaagcattgat
atgtacgccaactatatggcgcgtggcgaggagttttgtcgcctggttgaggggcaaata
tgctga
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