Pseudoalteromonas viridis: J5X90_03560
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Entry
J5X90_03560 CDS
T07232
Name
(GenBank) autoinducer binding domain-containing protein
KO
K20334
LuxR family transcriptional regulator, quorum-sensing system regulator CviR
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J5X90_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvb03000
]
J5X90_03560
Transcription factors [BR:
pvb03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
J5X90_03560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QTL36139
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All DBs
Position
1:812880..813617
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AA seq
245 aa
AA seq
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MINKDKLFQTLDFIDHCVKSDNDSHSVHLLFSKLDKIIPIKSAILAIDIHEQFQLTSPSQ
LFTYNLNSEWQQLYFQRKFYQQDPVLNAASHSSRVIDWQSAFQLSPAKQSYSSDFQLLSQ
KYVGSHGLSVVVNNHSGSTLLSIATQVIPDQNGEQLLSYIAPHFHELFSRDGENTRRKMG
MPQLSARELEVLKWAKEGKANGDIALILSISERTIKFHLSNIFTKLNVINRTQAIAKAMH
FGIIQ
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacaaggataaattgtttcagacactggattttattgaccactgcgtaaaatca
gataatgacagtcattcagtccatctgctgtttagtaaactggataaaattattcccatc
aaaagcgcgattttagccattgatatacacgagcagtttcaacttaccagtccctcgcaa
ctatttacctacaatttaaatagtgagtggcaacaactctactttcagcgcaagttctat
caacaagatccggtccttaacgcagcctcacacagcagccgggtcatagactggcaaagc
gcctttcaactctctccagccaagcagtcctattccagtgactttcagctgctgtctcag
aaatatgtgggcagtcacggcctgtcagttgtggtcaataatcacagtggctctactttg
ttgtcgattgcgacacaagttataccggaccaaaatggtgaacagctcctctcatatatt
gcgccacattttcatgagttattttcacgtgatggcgaaaatacccggcgaaaaatggga
atgccgcaattatccgctcgcgagcttgaagtattaaaatgggcaaaggaaggcaaagcc
aatggcgatattgcgctgatcctcagtatatctgagcgcaccatcaagtttcacttatcg
aatatatttaccaagctcaatgtgattaaccgtactcaggccatcgccaaagccatgcac
tttggtattattcagtag
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