Pseudoalteromonas viridis: J5X90_03805
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Entry
J5X90_03805 CDS
T07232
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
J5X90_03805 (ltrA)
Enzymes [BR:
pvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
J5X90_03805 (ltrA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
HNH_5
HNH_2
zf-RING_2
zf-C3HC4_3
zf-rbx1
Motif
Other DBs
NCBI-ProteinID:
QTL36186
LinkDB
All DBs
Position
1:complement(865173..866828)
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AA seq
551 aa
AA seq
DB search
MSAECMFHVPAFSHQAHSWHTIDWYSIEQKVRGLQVRIAKATKQQQWRKVKALQRMLVRS
FSAKALAVKRVTENRGKRTAGVDGELWSTPESKWLALFRLTRKGYKPKPLRRVYIPKANG
KRRPLGIPTMLDRAMQALYLLALEPVSETTADRNSYGFRPMRSTADAIEQCFVNLSRKHS
AKWVLEGDIKGCFDNISHDWLLANVPLDKQVLRKWLKAGFMESGKLNPTEAGTPQGGIIS
PVLANLALDGLEGLLESHFGKKNTKASYKTKVNFVRYADDFIITGISKELLEDEVKPLVT
AFMAERGLQLSPEKTVITHIEDGFDFLGQNLRKYQGKLLIKPSRKNLRNLLHKVKSIVTG
NKTVTASMLIAQLNPVLRGWANYHRHVVAKETFNYVDYRVWKMLWQWCRRRHANRRKRWI
KSKYFKSVGKRNWTFSGITIDGFDKRLIYTNDTVIKRHTKIKADANPYDLAFETYFEQRL
ERAWRDSMQGQRKVLTLWLRQQHRCPLCRQNITKETGWNIHHIVEKVKGGSDELSNLVLL
HPNCHRQLHSG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggaatgtatgttccatgtacctgcgttctcccatcaggcgcacagctggcat
accattgattggtattcaattgagcaaaaggtgagagggctacaagtacggatcgcaaag
gcgacaaagcaacaacagtggcgcaaggtgaaagctctgcaacgcatgttggtgcgctcg
ttttctgccaaggctttggcggttaaacgggtaactgaaaatcgaggcaaacggactgcc
ggtgtcgatggggagttatggagtacacctgaaagtaaatggctggcgctatttcgatta
acgcgtaagggctataagcccaaaccgttgaggcgggtttatattccaaaagcgaacggc
aagcgtcgaccgcttgggataccgaccatgctcgacagagccatgcaggcgttatacctg
ctggcactagagcctgtatcggaaaccaccgcagataggaatagctatggctttcgcccg
atgcgctctacagcagatgcgattgagcaatgttttgtgaatctcagtcgcaagcattct
gctaaatgggtgttagaaggggatattaaagggtgtttcgataacatcagtcatgactgg
ctacttgccaatgtcccattggataaacaagtactcagaaaatggctaaaagcggggttt
atggaatccggtaaattaaatccgacggaagcgggcacaccacaaggagggattatctct
ccggtgttggctaatttggcacttgatgggctggaagggttgcttgaatctcattttggg
aagaaaaataccaaagccagctacaagaccaaggtcaacttcgtgcgatacgctgatgac
ttcatcattactgggatctcgaaagagcttctagaagatgaagttaaacctctcgtaaca
gcctttatggctgaacgagggttacagttatcgccggaaaaaacggtgatcacgcatata
gaagacgggtttgacttcttggggcaaaacttacgaaagtaccaaggtaagcttttaatt
aagccaagccgaaagaacttgcgtaatttgcttcataaagtgaaaagcatagtgacgggt
aacaaaacagtgactgccagtatgttgatagcacaactcaatccggtgttaaggggttgg
gctaactatcatcgacatgtggttgcgaaagaaacctttaattatgtggactatcgggtt
tggaagatgttgtggcaatggtgtcgaaggcgtcatgccaacaggcgtaagcgctggatt
aagtctaagtactttaaatctgtgggcaaacgcaactggacattttccggtataacaatc
gacggttttgataagcgattgatatacaccaatgacaccgtgataaagcgacacactaag
atcaaagcggacgctaatccgtatgacttagcatttgaaacatatttcgagcagcgcctt
gagcgagcttggcgtgattcaatgcaaggtcaacgtaaagtgctaacgctatggctcagg
cagcagcatcgctgtccactgtgccgccagaatattaccaaagaaacaggatggaatatc
catcatattgtggaaaaggtaaaaggcggttcggatgagctaagtaatttagtgttgttg
catcccaattgtcataggcaattgcatagtggttga
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