Pseudoalteromonas viridis: J5X90_06025
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Entry
J5X90_06025 CDS
T07232
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvb03009
]
J5X90_06025
Enzymes [BR:
pvb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
J5X90_06025
Ribosome biogenesis [BR:
pvb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
J5X90_06025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF3482
Motif
Other DBs
NCBI-ProteinID:
QTL36593
LinkDB
All DBs
Position
1:complement(1419498..1420190)
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AA seq
230 aa
AA seq
DB search
MRLAKYLSHCGVCSRRQASRLIEAAEVTVNGRPANHIDHVTDADDVSVSGRPVSGPAPKK
LYAYHKPVGIDCKLRPDDASSLIHYLPPGERVYPIGRLDKDSRGLLLLTNDGELCNRLIH
PDHHQEKEYRVVVDRPFDAQFCAQMRAGVPVDGVMTQPCRVEPVTTDTFTIILKQGLNRQ
IRKMARYCGYRVVDLYRVRIANLRLDAQTLPPGHYQAIALTQLELQEKEK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctagccaaatacctcagtcactgtggtgtctgctcccgccgtcaggcctctcga
ctgatcgaagccgctgaggtgactgtaaatggtcgcccggcgaaccacattgaccatgtt
accgacgccgacgacgtttctgtcagcggccgcccggtctccggtccagccccgaaaaag
ctctacgcgtaccacaaaccggtgggcatagactgcaaattacgtccggacgacgccagc
agcctgatccattatctccccccgggtgagcgtgtttatcccattggccggttagataaa
gacagtcgcggattgttgctactcaccaatgacggcgaactctgcaaccggcttatccac
cccgaccatcatcaggaaaaagaataccgggtggtggtagaccgcccgtttgatgcgcaa
ttttgtgcgcaaatgcgcgccggcgtgccagtagatggcgttatgactcagccgtgtcgg
gtcgagcctgttaccaccgatacttttactatcattctcaaacaagggctgaaccggcag
atccgtaaaatggcgcgttattgtggttatcgggtggtggatttatatcgggtgcggata
gccaatttgcgcctggatgcacagaccctgccgcccggacactatcaggccattgcactg
acgcagcttgaactgcaggaaaaggaaaaataa
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