Pseudoalteromonas viridis: J5X90_06065
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Entry
J5X90_06065 CDS
T07232
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00300
Lysine biosynthesis
pvb00470
D-Amino acid metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01230
Biosynthesis of amino acids
Module
pvb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J5X90_06065 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5X90_06065 (lysA)
Enzymes [BR:
pvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J5X90_06065 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTL36601
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All DBs
Position
1:complement(1427415..1428668)
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AA seq
417 aa
AA seq
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MDFFHYQDNQLHAEQVAIRDIAENYGTPCYVYSRKTLERHYHAFTDAAQGHPHLVCYAVK
ANSNLAVLNVLARLGAGFDIVSQGELARVLKAGGDPAKIVFSGVAKTAQEIAFALKTGIK
CFNVESAAELRRISEVASELELLAPISIRVNPDIDAKTHPYISTGLKENKFGIDIKEAFD
VYQLACALPGIKVVGIDFHIGSQLTEVAPFIAALDKVLALVNTLESAGITLQHLDIGGGL
GVPYDSEKPPHPSAYAAEVKARLADYQHLELIFEPGRAIAANAGILVTKVEYLKPTKDKH
FAIVDAGMNDMLRPSLYQAWQQIIAVAPRQDDTPLHTYDVVGPVCETGDFIGKDRPLAIQ
PGDLLAQRGAGAYGFTMSSNYNSRPRIAEIMVDGDTCHLIRQRETLESLWQGEQVLP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatttctttcactatcaggataatcaactccacgctgagcaggtagccatccgtgat
atcgccgaaaactatggcacgccctgttatgtgtattcccgaaagacgctggagcgccat
tatcatgcgttcaccgacgcggcacagggacaccctcacctggtttgttatgccgtcaag
gccaacagcaacctggctgtgctgaatgtcttggccagattgggcgccggatttgacatt
gtctctcagggggagctggcgcgggtactcaaagccggcggcgatccggccaaaatcgta
ttttccggcgttgccaaaacggcacaggaaatcgcttttgcgcttaaaacaggcatcaag
tgttttaatgtggaatctgccgctgaattgcgtcgcatcagtgaagttgccagtgaactt
gagctactcgcgcccatttctattcgggttaatccggatatagatgccaaaacacacccg
tatatttccaccgggctgaaagagaacaaattcggcatcgacattaaagaagcctttgat
gtctatcagctggcatgtgccctgcccggcatcaaagtcgtaggcatcgacttccacatt
ggctcacagttaactgaagttgcgccctttattgccgcgctggacaaagtgctggcgctg
gtcaacacgcttgagtcggccggtattaccttgcagcacctggatattggtggcggcctg
ggtgtgccctacgacagcgaaaaaccaccccaccccagcgcgtatgccgctgaggtcaag
gcacgacttgccgactatcaacatctggagctgatctttgaaccaggccgtgccattgca
gcgaatgcaggcatactggttaccaaagttgaatacctgaagccgaccaaagacaagcat
tttgcgattgtcgatgcgggcatgaacgacatgctgcgcccttcgctatatcaggcgtgg
cagcagatcattgcggtcgccccaagacaggacgatacgcccttgcatacctatgatgtt
gtagggcccgtgtgcgagaccggagattttatcggcaaagaccgaccgctcgcgatccag
cccggcgacttgttggcgcaacgcggcgccggggcctatggttttaccatgagctcaaat
tacaactcacgcccgcgcattgcggaaatcatggtcgatggcgatacttgccaccttatc
cgccaacgagaaacgctggaatcgctgtggcagggcgagcaagtgcttccgtaa
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