Pseudoalteromonas viridis: J5X90_06575
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Entry
J5X90_06575 CDS
T07232
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5X90_06575 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_06575 (priA)
Enzymes [BR:
pvb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5X90_06575 (priA)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5X90_06575 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
SAM_SMF
AAA_30
Decapeptide
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QTL36692
UniProt:
A0ABX7VAA9
LinkDB
All DBs
Position
1:complement(1563966..1566137)
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AA seq
723 aa
AA seq
DB search
MRFAEVALKVPLHRTFDYRLEPEQHPCVGGRVRVKFANRACVAIVVALKSHSDVPEDKIK
ALESVLDTTPVLSPEHLGFLRFSAQYYCHPLGETLFTALPGALREGEEVDKTQVPVLTLT
EAGRETTQLRAKKQLALLEQLRNAGDATASELKTLGFSQAQIKALLEKALIQEELRTDTH
WQSAPLQLGKKPRLHPEQATACSAINSQAGFRTFLLEGVTGSGKTEVYLQSLEAILAAGK
QALVLVPEIGLTPQTVNRFKRRFEGLPIDLWHSNLTDNERLHTWRRAEQGESALVIGTRS
AIFLPFQTLGMIVVDEEHDGSFKQQDGLRYHARDLAAYRAAQGQFPLILGTATPALETLH
KALQNRYQLLPLTKRAQTQQDNRFVLVDMKGQPDQGGFAKASLDAIAATLARGQQVMVFL
NRRGFAPTLICHECGWLSNCDRCSTSATYHKSLRRLICHHCSEQTFVPVQCPDCGSTQIM
PTGYGTEQLEEFLSEQFADFPVHRIDRDSTRRKGSLESALDEINQGGARLLIGTQMLAKG
HHFADVNLVVILDVDSGLYSCDFRATEHMAQLITQVAGRAGRSGEAGTVLLQTHFPEHPL
LQDLVNNGYQDFARYALREREETQMPPYSHLALIRAEATNSQLVMAFLSDLVPATPYPGI
QLLGPIPAPMERLAGKYRYQLHIQAAQRKVLHQYLAQLADYIGQHKLANRVRWSIDVDPM
DTY
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgccgaagtcgctttaaaagtacctttacacagaacctttgattaccgcctt
gagccagagcaacacccctgtgtgggtggccgggtgagagtaaaattcgccaaccgagcc
tgcgtcgccatcgtggtggcgctgaagtctcacagcgacgtgcctgaggacaaaataaaa
gcgcttgagtcggtactcgataccacgcccgtattatcacctgagcatctcggctttttg
cgcttcagcgcgcaatattattgtcatccgctaggcgaaaccctgtttaccgccctgccc
ggtgcgctgcgcgagggtgaggaggttgataaaacccaagtgccggtgctgaccctcaca
gaggccggccgtgaaaccacccaactcagagccaaaaagcaactggcgttgcttgaacaa
ctgcgcaatgctggcgacgccaccgccagtgaactaaaaacactgggcttttcccaggca
cagatcaaggccttactggaaaaagcactgatccaggaagagctgcgcaccgacacccac
tggcagtctgcgccactgcaactgggcaaaaagcccaggcttcacccggagcaggccacc
gcctgcagtgccatcaacagtcaagccgggtttcgtaccttcttactcgagggcgtcacg
ggcagtggtaaaaccgaagtttatctgcaaagtctggaggccattttagccgccggcaaa
caagccttggtgctggtgccagaaattggcctgacgccacaaaccgtgaaccgctttaaa
cgccgcttcgaagggttaccgattgatctctggcactccaacttgactgacaatgagcgc
ttacacacctggcgacgagccgagcagggagagtctgcgctggtgattggcacccgctct
gctatctttttgccctttcagaccctgggcatgatagtggtcgatgaagaacatgatggc
tcgttcaaacagcaagacggattgcgctatcacgcccgtgacctggccgcctatcgtgcc
gcgcagggtcagtttccgttgatcctcggtactgccacaccggcactggaaaccctgcac
aaagcgctgcaaaaccgctaccagctgctgccactgacaaaacgggcgcaaacccagcag
gataaccgcttcgtactggtggatatgaaagggcaacccgatcaggggggatttgccaaa
gccagtctggatgccattgctgccacactggcgcgcggacaacaggttatggtgtttctc
aaccgccgcggttttgcccccactttgatctgccatgagtgcggctggctcagtaactgt
gaccgctgtagtaccagcgccacttatcataaatcactgcgcagactgatctgccaccac
tgctcagagcaaaccttcgtacctgtgcaatgccccgactgcggcagcacccagatcatg
ccaaccgggtatggaacagagcagctggaagaattcttatccgaacaatttgccgacttt
cccgtgcaccgcattgaccgcgactctacccgccgcaagggcagcctagaaagtgcactg
gatgaaattaatcagggaggcgcccgactgctgatcggcactcagatgctcgccaagggc
caccacttcgccgacgtcaatctggtggtgatcctcgacgtcgacagtggtttgtattcc
tgcgattttcgcgccaccgaacacatggcccagctgataacccaagtggctgggcgcgcc
gggcgcagcggcgaagccggtactgtgctgttgcaaacccatttcccggaacacccattg
ctacaggatctagtgaataatggctatcaggattttgcccgctatgcactacgcgaacgc
gaagaaactcagatgccaccctatagccatctggcgctgatccgcgcagaagccaccaac
tcgcagctggtaatggcgtttttatcggatctggttccagccaccccctaccctggtata
caattgctcggaccgatccccgcgccgatggaacgcctggccggtaaataccgatatcaa
ttacatattcaggcagcgcagcgcaaagtactgcaccaatacctggcgcaactggccgac
tatatcggtcagcataaacttgccaaccgggtgcgctggagtattgacgttgaccctatg
gatacctattaa
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