Pseudoalteromonas viridis: J5X90_07360
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Entry
J5X90_07360 CDS
T07232
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvb03016
]
J5X90_07360 (trmA)
Enzymes [BR:
pvb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
J5X90_07360 (trmA)
Transfer RNA biogenesis [BR:
pvb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
J5X90_07360 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_31
Methyltransf_11
Methyltransf_12
PrmA
Motif
Other DBs
NCBI-ProteinID:
QTL36828
UniProt:
A0ABX7VDN5
LinkDB
All DBs
Position
1:complement(1722455..1723552)
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AA seq
365 aa
AA seq
DB search
MAVITIDTSTYEQQLKEKQQRISAQFARFDAPQLEVYDSPKSHYRQRCEFRVWHDGDDLF
HIMFDQQTKEKIRVDQFDPGAPLVNEMMQVMMDKLRHNEILRRKLFQIDYLTTLSGEVLI
SLLYHKALDDAWQEAMQVLRQELQQSYKVDFIGRARKQKVVFGNDFVTEQLTVNGKQYTY
QQVENSFTQPNATVNEKMLAWAQDLCAPLQNDLLELYCGNGNFSIALAGQFDRALATEIS
KSSVHSAQYNIAANKVDNLDIIRMSSEEFTAAMKGEKQFSRLKGIDLQSYNCQTILVDPP
RAGMDELTCKLVSQYDNIIYISCNPDTLERDLDMLCNTHQVSRIAIFDQFPYTHHVESGV
FLTRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatcacgattgacacttcgacctacgagcaacagttgaaagaaaaacaacag
cggatcagcgcgcaatttgcccgcttcgatgcgccgcaactggaagtgtacgactccccc
aaaagccactatcgccagcgttgcgaattccgcgtctggcatgatggggacgatctgttc
catatcatgtttgatcaacaaaccaaggagaagatccgcgttgatcaattcgatccgggc
gcaccgctggtaaacgaaatgatgcaggtcatgatggataagctgcgccataacgagatc
ctgcgccgtaaactgttccagattgactatctcaccacccttagcggtgaagtgctgatc
agcctgctttatcacaaagcactggacgacgcatggcaagaggccatgcaggttttgcgt
caggagctacaacaaagttataaagtcgactttattggtcgcgccagaaaacaaaaagtg
gtgtttggcaatgactttgtaactgaacagctgaccgtcaatggcaaacagtacacctat
cagcaggttgaaaacagtttcactcagcctaatgcgacagtaaatgaaaagatgttggcc
tgggcacaagacctgtgcgcaccactgcaaaatgatttgctggagctgtactgtggtaat
ggtaacttttctattgccctggccgggcaatttgaccgagcactcgccacagagatctct
aaatcgtctgttcattctgcacaatacaatattgcagccaataaggtggataacctggat
atcattcgtatgtcgagtgaagaattcacggcagccatgaaaggcgaaaagcagttctcc
cgccttaaaggcatagatctgcaaagttacaactgccaaaccattttggtcgacccgccc
cgtgctggtatggacgagctgacctgtaagctggtcagtcagtacgacaacatcatttat
atttcctgcaacccggacacgctggagcgcgatttagacatgctgtgcaacacccaccag
gtatcgcgtattgctatcttcgatcagttcccttatacccaccatgtggagtcaggcgtt
tttctgaccagaaaataa
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