Pseudoalteromonas viridis: J5X90_07475
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Entry
J5X90_07475 CDS
T07232
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03030
DNA replication
pvb03430
Mismatch repair
pvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5X90_07475 (ssb)
03430 Mismatch repair
J5X90_07475 (ssb)
03440 Homologous recombination
J5X90_07475 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvb03032
]
J5X90_07475 (ssb)
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_07475 (ssb)
03029 Mitochondrial biogenesis [BR:
pvb03029
]
J5X90_07475 (ssb)
DNA replication proteins [BR:
pvb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J5X90_07475 (ssb)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
J5X90_07475 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
J5X90_07475 (ssb)
Mitochondrial biogenesis [BR:
pvb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
J5X90_07475 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QTL36848
LinkDB
All DBs
Position
1:1751061..1751753
Genome browser
AA seq
230 aa
AA seq
DB search
MARGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQLQERTEWHRVVLF
GKLAEVAGEYLRKGSQVYIEGRLQTRKWTDQGGQERYTTEIVVDMGGQMQMLGGRGEQGG
GQYQGGQQGGQNYGQSNQSNYGNQGGQSQYGQQQQGGFAPQQAQQPQQNQQQGGGFGGQS
MGQQPQQSAPAQGGFAPQQGNAGGNTGGNASGSASNPMEPPIDFDDDIPF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggtgtaaacaaagttattttggttggtaatttaggccaagatcctgaagta
cgttatatgcctaacggaaacggcgtagcgaacatcagtattgcaacgaccgacagttgg
aaagataaaaacacaggtcagttgcaggagcgcactgaatggcaccgtgtagtgctattc
ggtaagctggcagaagtcgcaggcgagtacctgcgtaaaggatcacaagtctacatcgaa
ggtcgcttgcaaacacgtaagtggacagatcaaggtggacaggaacgctataccacagag
attgttgtagacatgggtggccagatgcaaatgctaggcggtcgtggcgaacaaggtggt
ggtcagtaccagggtggacagcagggtggtcaaaactatggtcagtctaaccagtctaac
tatggtaaccagggtggccagtctcagtatggacaacagcagcaaggcggttttgcgcct
cagcaagcacaacagcctcagcaaaaccaacagcaaggcggcggttttggtggtcagtct
atgggtcagcaaccgcagcaaagcgcgcctgcacaaggcggcttcgcgcctcagcaaggc
aatgcaggtggtaacaccggtggcaatgcgagcggcagcgccagtaacccgatggaaccg
cccatcgatttcgatgatgatattccgttctaa
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