Pseudoalteromonas viridis: J5X90_07635
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Entry
J5X90_07635 CDS
T07232
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvb03019
]
J5X90_07635 (rapZ)
Messenger RNA biogenesis [BR:
pvb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J5X90_07635 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
AAA_18
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QTL36880
LinkDB
All DBs
Position
1:complement(1789657..1790502)
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AA seq
281 aa
AA seq
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MQLIIVSGRSGSGKSVALRVLEDLGYYCADNIPVNLLPALVRSVSDSYDKIAVSVDVRNL
PKDQQELDDILEYLPGFAEPNIFYLDSEDQILIRRFSETRRLHPLSLADFSLDKAIKKEK
ELLDPLIRRANITIDTTDMSIHQLAERIREKILGKKDKQLIITFESFGFKHGIPKEADYV
FDARFLPNPHWEPELKPLTGLDKPVIDYLASHSLVQKFTWQIQTFVQTWLPHLERNNRSY
LTISIGCTGGQHRSVYLAQTLGERFARTHSNVKIHHREQEK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctaattattgtcagtggtcggtccggctcaggaaaatcagtcgcccttcgcgta
ctggaagacctggggtactactgcgcagataacatcccagttaacctgctgccagcattg
gtgcgcagcgtatcagacagttatgataaaattgctgtaagcgtcgacgtacgtaacctg
ccaaaagatcaacaagagctcgatgatattctggaatacttgcctggatttgccgaaccc
aatattttctaccttgatagtgaagatcaaatcctgatccgtcgcttttccgaaacacgc
cgtctgcatccgctatcgctggccgacttttcgctggataaagccatcaagaaagaaaaa
gagctgcttgatccgcttatccgccgcgccaatatcaccatagatactacagatatgagt
atccatcagctggcagagcggatcagggaaaaaattctcggtaaaaaagacaaacaatta
attattacgttcgaatcctttggcttcaaacatggcattccgaaagaagcagactacgtc
ttcgacgcccgttttctacctaacccacactgggagccagagcttaaacctttgacaggc
ttggataaacccgtcattgattacttggccagtcacagcttggtgcaaaagtttacctgg
cagatccaaacctttgtgcaaacctggttgccacatctggaacgcaataaccgcagctat
ctgacgatttcgataggctgtaccggcgggcaacatcgttccgtctatcttgcccagact
ttgggtgagcgttttgcccgtactcatagcaatgtgaaaatccatcaccgcgaacaagaa
aaatga
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