Pseudoalteromonas viridis: J5X90_09575
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Entry
J5X90_09575 CDS
T07232
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J5X90_09575 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_09575 (xseB)
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J5X90_09575 (xseB)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J5X90_09575 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SRP_SPB
Motif
Other DBs
NCBI-ProteinID:
QTL33867
LinkDB
All DBs
Position
1:complement(2209906..2210148)
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AA seq
80 aa
AA seq
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MATKKPENMSFEEAVDELESIVQGMERGELTLDQSLKQFERGIKLANASSHKLQQAEQKV
AILLGKDEQSPLNDFTDELE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaaaaaccggaaaacatgagctttgaagaagccgttgacgagcttgaaagc
attgtacaagggatggagcggggcgaattgaccctggatcaatccctcaagcaatttgag
cgtgggataaaactggctaacgcctcctcacacaagctgcaacaggcagaacaaaaagta
gcgattttgcttggtaaagacgagcaaagtccgctgaatgactttacggacgagctggaa
taa
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