Pseudoalteromonas viridis: J5X90_10725
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Entry
J5X90_10725 CDS
T07232
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00260
Glycine, serine and threonine metabolism
pvb00630
Glyoxylate and dicarboxylate metabolism
pvb00670
One carbon pool by folate
pvb00785
Lipoic acid metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01200
Carbon metabolism
Module
pvb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
J5X90_10725 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J5X90_10725 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
J5X90_10725 (gcvP)
00670 One carbon pool by folate
J5X90_10725 (gcvP)
Enzymes [BR:
pvb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
J5X90_10725 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
QTL34050
LinkDB
All DBs
Position
1:2445513..2448410
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AA seq
965 aa
AA seq
DB search
MSNAKSLEQLEQKQDFIRRHIGPSPAQVSDMLAALGVSSVEELIGQTVPSSIRLEQGLQI
GESRTEVETLSYLKSVASKNKVFKSYIGQGYHPTHVPNVILRNVLENPGWYTAYTPYQPE
IAQGRLESLLNFQTMTMDITGLDLASASLLDESTAAAEAMALAKRVSKAKKANLFFIAED
VHTQTIDVVTTRAEQFGFEVVVGPASEAANHEIFGALFQYPTTSGEVVDITDIIAQVQSK
KAIACVAADIMSLMLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRLGNDALRMAMQTREQHIRREKANSNICTAQVLLANMAAFYAVYHGPQGLKT
IAERINRFASILATGLKAKGVALKHDTWFDTITVVADDADKDAVVARAVANEVNFAINHA
GEYSIALNETTTRGDIAELFDIILGEGHGLDVAALDSEVAANNITGIPASLVRDDEVLTH
DNFNSYHSETEMLRYIKRLENKDLALNHSMISLGSCTMKLNATAEMIPVTWPEFAELHPF
CPLEQAQGYQVMMTELHDWLVNITGYDAVSLQPNSGAQGEYAGLIAIRKYHESRGEGHRN
VCLIPSSAHGTNPASAQMASMKVVVVGCDKDGNIDLDDLRAKAEDVSENLSCIMVTYPST
HGVYEEAIREVCDIVHQHGGQVYMDGANMNAQVGVTSPGSIGSDVSHLNLHKTFCIPHGG
GGPGVGPIGVKSHLAPFMPNHSVIKVAGTNEGNGAVSAAPYGSAAILPISWAYIAMMGSE
GLKQATEMAIVNANYLTEQLSKHYPVLYRGRNDRVAHECIIDLRPLKEASGITEMDVAKR
LMDYGFHAPTMSFPVAGTLMIEPTESESKVEIDRFIEAMISIRAEIAKVENGEWSVENNP
LVFAPHTQADVLGNEWDRAYDRFYAAFPVASVAKDKFWPTVTRIDDVYGDRNLICSCPAV
ETYAE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaaatctcttgaacaactagagcaaaagcaagactttattcgtcgccat
atcggcccgagcccggctcaggtgagtgacatgcttgctgcgcttggagtatcgagtgtt
gaagagctgatcggtcagacagtacctagctcaatccgtttagagcaaggcctgcaaatt
ggtgaaagccgtaccgaagtagaaacgctgagctacctgaaatcagtagcaagcaaaaac
aaagtcttcaaatcttacatcggtcagggttaccacccgacacacgtgcctaacgttatc
ttgcgtaatgtactggaaaacccaggctggtatacagcttatacgccgtatcagccagag
attgcacaaggccgtcttgagtctttgcttaacttccagactatgaccatggacatcacc
ggtcttgacctggccagtgcgtcactgcttgacgaatcaaccgcagcagccgaagccatg
gcgctggctaagcgtgtgtctaaagcgaaaaaagcgaacctgttcttcattgctgaagac
gtacacacacaaaccatcgacgtcgtcacaacccgtgccgagcagtttggttttgaagtg
gtcgttggcccggcaagcgaagcagcaaaccacgagatcttcggtgccctgttccagtac
ccaaccacatcaggtgaagtggttgacatcacagacatcatcgcacaagtacaaagcaaa
aaagcgattgcctgtgtggccgctgatattatgagcttaatgctgctgaaagcgccgggt
aaactgggtgcagacgtggtactgggctctgcacagcgctttggtgttcctatgggctac
ggtggtccacacgctgcgttcttcgcaacacgcgatgcctacaagcgttcactgccaggg
cgtatcatcggtgtatcaaaagaccgtttaggtaacgacgcactgcgtatggcaatgcaa
acacgcgagcagcacatccgccgcgaaaaagccaactcaaacatttgtacagcgcaggta
ctgctggccaacatggctgcattctatgcggtgtaccacggtccacagggcctgaaaacc
attgccgagcgcattaaccgtttcgccagcattctggcaaccggcctgaaagccaaaggc
gtggcactgaagcacgacacctggtttgacaccatcacagtggttgctgacgacgcagac
aaagacgcagtcgtcgcgcgcgccgttgcaaacgaagtcaactttgccatcaaccacgct
ggcgagtactcgattgcgctgaacgaaacgacgactcgcggtgacatcgctgaactgttc
gacatcatcctgggtgaaggccatggcttagatgtggctgcgctggacagcgaagttgct
gcaaacaacatcacaggtattccggcaagcctggtacgtgatgacgaagtactgacgcac
gacaacttcaacagctaccatagcgaaactgagatgctgcgttacatcaagcgtcttgaa
aacaaagatctggcactgaaccactctatgatctcactgggttcttgtaccatgaagctg
aacgcgaccgctgaaatgatcccggtcacctggcctgagttcgctgaactacacccattc
tgcccactagagcaggcacagggttatcaggtcatgatgactgagctgcacgactggttg
gttaacatcacaggctatgacgcagtatcactacaacctaactcaggtgctcagggtgaa
tacgcgggtcttatcgccattcgtaaataccacgagtcacgcggcgaaggtcaccgtaac
gtgtgtctgatcccaagctctgcgcacggtactaacccggcgtcggcgcaaatggccagc
atgaaagtagttgtggttggttgtgataaagacggtaacatcgacctggatgacctgcgc
gcgaaggcagaagacgtatctgagaacctgtcttgtatcatggttacttacccgtctacc
cacggtgtatacgaagaagccatccgtgaagtgtgtgacatcgttcaccagcacggcggc
caggtttacatggacggcgcgaacatgaacgcacaggttggtgtaaccagcccgggctca
attggttctgacgtatcgcacctgaacctgcataaaacattctgtatcccgcacggcggt
ggtggcccgggtgttggtcctatcggtgttaaatcgcaccttgcgccatttatgcctaac
cacagcgtgatcaaagtagcgggcaccaacgaaggtaacggcgcagtttctgcggcacct
tacggctcagcagccatcctgccaatctcatgggcgtacattgccatgatgggcagcgaa
ggtctgaagcaggctactgaaatggccatcgtgaacgccaactacctgacggagcaactg
agcaagcactacccggtactttaccgtggccgcaacgaccgcgttgcccacgagtgtatt
atcgacctgcgcccgcttaaagaagcctctggcatcacagaaatggacgttgctaagcgc
ctgatggactacggtttccacgcaccgactatgtcattcccggttgccggcacgctgatg
atcgagccaacggaatctgagtctaaggtagaaatcgaccgcttcatcgaagccatgatc
tctatccgcgctgaaatcgccaaagtagaaaacggcgaatggtcagtagaaaacaaccca
ctggtgttcgcaccacacacccaggcagacgtactgggcaacgagtgggatcgcgcctac
gaccgcttctacgcagcattcccggttgcatcagttgctaaagacaagttctggccaacg
gtaacccgtatcgacgacgtatacggcgatcgtaacctgatctgctcttgcccggctgta
gagacttatgctgagtaa
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