Pseudoalteromonas viridis: J5X90_11725
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Entry
J5X90_11725 CDS
T07232
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb02020
Two-component system
pvb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J5X90_11725
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
J5X90_11725
02025 Biofilm formation - Pseudomonas aeruginosa
J5X90_11725
09142 Cell motility
02040 Flagellar assembly
J5X90_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvb03000
]
J5X90_11725
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pvb02035
]
J5X90_11725
Transcription factors [BR:
pvb03000
]
Prokaryotic type
Helix-turn-helix
Other families
J5X90_11725
Bacterial motility proteins [BR:
pvb02035
]
Flagellar system
Flagellar assembly proteins
Others
J5X90_11725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
Mg_chelatase
AAA_7
AAA
AAA_16
MCM
TIP49
DUF6946
Motif
Other DBs
NCBI-ProteinID:
QTL34237
UniProt:
A0ABX7V467
LinkDB
All DBs
Position
1:2675228..2676670
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AA seq
480 aa
AA seq
DB search
MITILDNNNNRATGLAAALSFVGQPAQVIAEPEFSSDLFSNLQEPVVILGALSQHNHEVL
IKSLPAVPFLLIGETLRPLLSLANVIGLITEPFSQEVTMQLLHDCQQYLRMLPGKSTQLN
DAKSFDGLVGDTKAVKEVRFLISQVAKTDANVLILGESGTGKEVVARNVHLLSNRNSGPF
VPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVKL
LRVLQERSYERVGGTKPIQADVRVIAATHRNLEIMIEEGKFREDLFYRLNVFPIENPSLR
ERADDIPLLLKELLRRVAEQGGSSVKFTDRAIDSLKAHSWPGNIRELANLVERMAIMFPE
KVVDVTDLPGKYRYIEVEAYEPEYPEELLEKDVFNELFSDGFSDFEDEEESLEQSSAETG
LGLLPDEGIELKEYLADMEISLITQALERYDYVVARAAEILGVRRTTLVEKMKKYNLNRD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgattacgatcctcgataacaataataacagagcaaccggactggctgcggcattgagt
tttgtcgggcagccggcacaggtgattgcagagccggagttttcctccgatctattcagc
aatctacaagagccagtggtgatcctgggtgctctgtcacagcacaatcatgaggtgttg
ataaaatcattgcctgcagtgccatttttgctgattggggagaccctaaggccgctgctt
tccctcgccaatgtgattggtctgatcacggaaccttttagtcaggaagtgactatgcag
ctgttgcacgattgtcagcagtatctgcgtatgttgccgggcaagtcgactcagctcaat
gatgctaagtcgtttgatggcctggtaggtgataccaaagccgttaaagaagtgcgcttt
ttaatctctcaggtggctaaaacagacgccaatgtgttgatccttggcgagtccggtaca
ggtaaagaggtggtcgcgcgcaatgtacacttgctgtctaaccgtaactcaggcccgttt
gtaccggttaactgtggtgcgattcccggtgagctactggaaagcgagttgtttggtcac
gagaaaggcgcatttaccggcgcaatctcggcgcgtaaagggcgctttgagttggcacaa
ggcggcacgctgtttctcgacgaaataggcgatatgccgttgcagatgcaggttaagttg
ctacgtgttttgcaagagcgcagttatgagcgcgttggcggcactaagcccattcaggca
gatgtcagggtgattgcagccacacaccgtaatttggaaattatgatcgaagagggtaag
ttccgtgaggatttgttctaccgcctcaatgtatttcccatcgagaacccctcgctgcgt
gaacgtgctgatgatattcctctgttactcaaagagttactgcgccgtgttgcagagcag
ggcggcagttcagtcaaattcaccgaccgtgcaattgatagcctaaaggcacatagctgg
cctggtaatattcgtgagctggcaaacctggtagaacgcatggcgattatgtttccggaa
aaagtggtggatgtcacagacttaccgggtaagtatcgttacatagaagtcgaagcctac
gagcctgaatatccggaagaactgcttgaaaaagatgtctttaacgaactgttcagtgac
ggatttagcgattttgaagatgaagaagaatcacttgaacagagcagcgcagagactggt
cttgggctactaccagatgaagggatagagctaaaagagtatctcgcagacatggaaatt
agcctgatcacccaggcacttgagcgctatgattatgtggttgccagagctgcagagatt
ttgggtgtacgccgtaccacgctggtcgaaaaaatgaaaaaatacaatctaaaccgcgac
tag
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