Pseudoalteromonas viridis: J5X90_11740
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Entry
J5X90_11740 CDS
T07232
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb02020
Two-component system
pvb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J5X90_11740
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J5X90_11740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pvb02022
]
J5X90_11740
02035 Bacterial motility proteins [BR:
pvb02035
]
J5X90_11740
Two-component system [BR:
pvb02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
J5X90_11740
Bacterial motility proteins [BR:
pvb02035
]
Flagellar system
Flagellar assembly proteins
Others
J5X90_11740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
MerR
Mg_chelatase
AAA_16
FleQ
AAA
MFD_D3
Sigma70_r4_2
MCM
DUF2089
nSTAND3
AAA_14
AAA_3
HTH_17
HTH_24
HTH_20
AAA_19
Xre-like-HTH
HTH_Crp_2
HTH_23
AAA_22
HTH_28
AAA_7
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QTL34240
LinkDB
All DBs
Position
1:2678657..2680066
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AA seq
469 aa
AA seq
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MSNKILVVEDDAGLREALIDTLEMSGFECVEADSAEQAVILLKEQVFSLLVSDVQMGAMS
GLDLLRTVKLNYPELPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYMPE
KEKETDGPVVADSKSLELLELAKKVARSDASVMVLGPSGSGKEVLARYIHDRSERAEQPF
VAINCAAIPENMLEATLFGYEKGAFTGAIAACPGKFEQAQKGTILLDEITEMDLGLQAKL
LRVLQEREVERLGGRKTIELDVRVLATSNRDLKEAVKDGVFREDLYYRLNVFPLTWLPLA
ERSGDVVPLAQHLLQRHCDKAGKLTPTLSQCAKDKLLSHAWPGNVRELDNVVQRALILQQ
GTCITADDIFIENFAPVVSAKVQQPAEQSMVFSAPEAESVSQADINTAEDAEGLNYKEEL
QDKEHQIILDTLSRCNGKRKDVAELLGISPRTLRYKLARMRDLGLPVPA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagattctggttgtagaagacgacgccgggttgcgcgaagcactgattgac
acccttgaaatgtcggggtttgagtgcgtcgaggcagatagcgctgagcaggcagtcata
ttgttaaaagaacaagtattttcactgctggtcagtgatgtacaaatgggggccatgagt
ggcctggacttgctcagaacggtgaagctgaattatcccgagctgcctgtgctgatgatg
accgcctatgccaccatagatgacgcagttgaagcaatgcgactcggggccattgattac
atggcgaaaccttttgcacccgaagtcctgcttaacatggtcagccgttatatgcctgag
aaagagaaagaaaccgatggcccggttgtggcagacagcaaaagtcttgaattgcttgaa
ctggccaaaaaagtagctcgctctgatgccagtgtcatggtgttgggccccagtggttca
ggcaaagaggtactggctcgttatattcacgaccgttcagagcgcgcggaacagccattt
gtggccatcaactgtgcggctatcccggaaaatatgctcgaagccacgctgtttggttat
gagaagggcgcttttactggcgcaattgccgcgtgtccgggtaagtttgagcaggcgcaa
aaaggcaccattttattggatgagatcactgagatggatctgggcctgcaagcaaaacta
ctgcgggtactgcaagaaagagaggtagaacgtcttggtggtcgtaaaaccattgagcta
gatgtaagagtgctggcaaccagtaaccgtgatctcaaggaggcggtgaaggatggtgta
ttccgggaagatctgtattaccggctcaatgtgtttcctttgacctggctgccgctggca
gaacgcagtggtgatgtagtaccactggcacagcacctgttacagcgccattgtgacaaa
gccggaaaattgacacctacgctctcgcagtgtgccaaagacaagctacttagccatgcc
tggcctggtaatgtcagagaattagacaacgtggttcagcgagcgctgatcctgcagcag
ggaacatgcattactgctgatgatatttttatagagaattttgcgcccgttgtaagcgcc
aaagtgcagcagcccgcggagcaatcgatggtgttctctgcgcccgaagcagaatccgtt
agtcaggctgatatcaatacagctgaggatgccgaaggcttgaactataaagaagagttg
caggacaaagagcaccagatcatcctggatacgttgagccgttgcaacggtaagcgcaag
gatgtggctgaattgctggggatcagtccaagaacactcagatataagctggccagaatg
cgcgatttggggctacccgtgccagcgtaa
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