Pseudoalteromonas viridis: J5X90_12060
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Entry
J5X90_12060 CDS
T07232
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvb03029
]
J5X90_12060 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_12060 (bamA)
Mitochondrial biogenesis [BR:
pvb03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
J5X90_12060 (bamA)
Transporters [BR:
pvb02000
]
Other transporters
Pores ion channels [TC:
1
]
J5X90_12060 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
QTL34299
LinkDB
All DBs
Position
1:2742872..2745343
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AA seq
823 aa
AA seq
DB search
MPIKKHLAVTSLLGASFAALGQNSFIVEDLKVEGLQRVALGAALTHIPINVGDQVDDYTV
SKTIKALFASGHFDDISAYRDGNQVIFKVKERPTIASIEFDGNKDIKDEQLQESLDQQNI
RAGETLDRTVIDSVEKGLIEFFHSIGKYNAKIEMSIVELPRNRVRLKLDFKEGDAASVRQ
INLVGNELFSDEELLKLVESQQDLPWWKFLSSDRYQKQTIEGDLEKIRSYYLDRGYLRFN
IDSTQVSVSPERESVYVTANLTEGEQYMVKDFEFIGDLLGREDLIRSVVPLKSGELYNGS
IVTATEEFIKSYLARFGYANAEVRTVPDIDDENKEVKLTLAVDPGKRVYVRRIAVNGNQV
TADHVVRREMTQLEGAWLSNQSLERSKLQIQRLPYMESVDFEVKPIPGVDDQVDVDFKVK
EQPAGSFQAGVAYGSYGGLQFNVGVSESNFLGTGNQLAFNINTGRGSKRYTVSYTNPYFT
PDGVSQGSSIFYSDFDGSKLGLIDYDQTNYGIGTNFGFPIDAVNRINFGVRWIEEELDRI
PDYEQSRVMRLAFTDPENPDAGFDFTKYELSVGWSRITVNRGMFPTDGSRQSATFRVTTP
NSDLNFFKVNYDSRFYWPVSNDHRWVFSARAGLAYGNGYGEINGFEQTLPFQEFYRITEM
ELRGFDRNTILPRALQRSPSSLGGTPLPDGTVPGSIGGDPQFDNLIQGGRIGGNAKALAG
IEMIVPTPFMDEENTSSVRTSFFVDAANVWDTEFDADRYTNLSPDVYKTLSDYSDPSRFR
VSTGLSVQWISPMGPMLISFAYPLKKEEDDETDFISFNISNTF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaaaaaacatttagctgtaacgagtttactgggcgcgagctttgctgctctg
gggcaaaactcctttatcgtagaagatttgaaagttgaaggcctgcagcgtgttgcgctg
ggcgcggcgttaacacacattcctattaacgtgggtgatcaagttgatgactacacagtg
tcaaagacaatcaaggcgctgtttgcgtctggtcacttcgacgatatctcagcataccgt
gatggcaatcaggtaattttcaaagttaaagagcgtccgaccattgcctcaatcgaattt
gatggtaacaaagacatcaaagatgaacagttgcaggaaagcttagatcagcaaaatatc
cgtgccggtgaaaccctcgacagaacggtcatcgacagcgtcgaaaaaggcctgatcgag
ttcttccatagtatcggtaaatacaatgccaaaattgagatgagcattgttgagttacct
cgcaaccgggttcgtttaaagctggacttcaaagagggcgatgcggcatcggtcaggcag
atcaacctggttggtaacgagctattctctgatgaagaactcttgaagctggttgagtcg
caacaagatttgccctggtggaagttcctgtcgagcgaccgataccagaagcaaaccatt
gaaggcgatctggaaaagatccgcagttattatcttgaccgcggctacctgcgtttcaac
atagattcaactcaggtatccgtgagcccggagcgagagtctgtttatgttactgccaac
ctcactgaaggcgagcagtatatggttaaagacttcgagttcattggcgatctgcttggc
cgtgaagacttgatccgcagtgttgtaccactgaaaagcggcgaactgtacaacggctca
atcgtaacggccaccgaagaattcatcaaaagctacctggcacgctttggttatgccaat
gctgaggtacgcaccgttccggatattgatgacgaaaacaaagaagtaaaacttaccctg
gcggttgacccgggcaagcgtgtttacgtacgccgcattgcggtaaatggtaaccaggtc
actgccgaccacgtggtgcgtcgtgaaatgacgcagcttgaaggcgcctggttgtctaat
cagagtcttgaacgctcaaaattgcagatccagcgactgccgtatatggaaagtgtagat
tttgaagtgaaacctattccaggtgttgatgaccaggtggatgttgacttcaaagtaaaa
gagcagcccgcggggagcttccaggccggtgtggcctatggctcatacggcggcttgcaa
tttaacgttggggtcagtgagtctaacttcctgggtaccggtaatcagctggcgtttaac
attaatacgggccgcggctcgaagcgctacacagtatcttatactaacccttacttcaca
ccggatggtgtgtcgcaaggtagtagcatcttctacagcgactttgacggtagcaagctg
ggcctgatcgattacgaccagaccaactatggtattggcaccaatttcggtttcccaatt
gatgcggtgaatcggattaactttggtgtacgctggattgaagaagaactggatcgtatc
ccggattacgagcaatctcgggtgatgcgtttggcctttaccgatccggaaaacccggat
gcgggattcgactttaccaagtacgagctgagcgtgggctggtcacggatcacagttaac
cgtggtatgttcccgacagacggctctcgacagagcgccactttcagggtgacaacgcct
aactcggatctgaacttcttcaaagtaaactatgattcacgcttctactggcctgtcagt
aacgatcatcgctgggtattctctgcccgtgcgggacttgcttatggtaatggttacggc
gaaatcaacggctttgaacaaaccttgccattccaggaattctatcgcattaccgaaatg
gaattgcgtggctttgaccgtaataccattttgccgcgagcattgcagcgttcaccttcc
tcacttggtggcacaccgttacctgatggtaccgtgcctggctcaattggtggcgatccg
cagtttgataacctgatccagggcggtcgtatcggtggtaacgcaaaagcgctggccggt
attgagatgattgtacctacgccattcatggatgaggaaaataccagttcagtacgtacc
agcttcttcgttgatgctgcgaacgtctgggataccgagttcgatgctgatcgttatacg
aacttgtcaccagatgtatataaaacattgtcagactactcagatccaagtcgattcaga
gtgtctacaggcttatctgtacagtggatctcgccaatgggacctatgttgatcagcttt
gcctacccactgaaaaaagaagaagatgatgaaactgacttcatcagctttaacataagt
aatactttctaa
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