Pseudoalteromonas viridis: J5X90_13530
Help
Entry
J5X90_13530 CDS
T07232
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_13530
Transporters [BR:
pvb02000
]
Other transporters
Pores ion channels [TC:
1
]
J5X90_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
QTL34558
LinkDB
All DBs
Position
1:3069988..3073032
Genome browser
AA seq
1014 aa
AA seq
DB search
MAKRTTKILTPVAASIALSLGLSGCSLFDDDDNNVPVNPTNPSVEGSVNANFSVSISGKA
VKGTLSGAMVSVKTVDAQGNKVDLAYRTQAGEESATETAETEEAAKAKASAKLISANPAE
LKTTTNGFYEIFVDENFSGPVYITVTTTKEGDALVKCDAFAGCGAGSAVKVDDGSVYKEN
GKIDFGEWYKDDLELSVVKLITPASSDSATTAKRGPSFADGDDGFYRANLSVFTSTAARI
LLGAGTEIDAASVGAASTQVIQQLVGDVSLVAALANDLSLGGAIDFTSVDGSEKLDAGAL
VLIQVASSLQSLAGKDGRPLGEVLTELSADVETGNLANSQTFTRLKDEAKKAGNVLRAVV
SGDQAAIKAALVEAGVSEEDIDAVAADIESAVDTAVNNGATSEDDLKDDIDTVVDQLDDI
GNGDASSDKQSEAILASVASSQTALAGSDTTLAGFATSLETVKGLGADLSTKEKAIEYSA
AATVLSTQYTAAINLDADGDNLGKLLAREFATAEQLVSAATQLVTQNAKYQPTLDQANAL
LTQVTALIAQRDQLSTDIAAELAAAKAKIDEYGAALDAAKKASDDSLVVANTDKQVADEK
KAAFETQQLVAENAVKAITDQDSAVLALAELNKAQAALAEALTAYNNAETSANTALTLAN
AYKAEAQNQGESTDSADLAIAQANILIDGAKAALISLDASRTKLSIYSNTALGKQGSDKL
VNISFVTKEGADAIFNAGEILYDVVRDIWDSGLDTGKHSGTAPNFPNWAYSYDTDDFELK
LKNTQGDEQIDAVYQITSAGSTSRVVLTWSGLLTADSGQKIEIQKADLGACDAWAVSNNG
IPNASCSVLYVEGSISKIEDVESVTHAKTFNVVEFVDGQYGFKGSFSSDATAVDAQGNPV
ALFTDGAIELADVTLSGRSEDTDFTAHFDLRNESGSNDLGLANIMLDNFNGYAFKVSLID
ESGPLLGNVSLNNDTNIPAIVGNVEEITNGFRIDYINGESIEYTDIDFLGQSNN
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagcgcacaacaaaaatactcacacccgtggcagcatccatcgctttgagtttg
ggcctctcaggctgtagccttttcgatgatgacgataataatgtccctgttaacccaacc
aacccatccgttgagggaagcgtcaatgccaatttcagtgtgtctatctccggcaaagcc
gtaaaaggtacgcttagtggcgcaatggttagtgtcaagacagtggatgcacaaggtaat
aaggtagatttagcgtatcgtactcaggccggtgaagaatcagcaacagagactgccgaa
acagaagaagcagcaaaagccaaggcaagtgccaagcttatcagcgctaacccagccgag
ctaaaaaccacaacgaatggtttctatgaaatatttgtcgacgaaaatttctccggccct
gtttacatcactgtcactacgaccaaagagggcgatgcacttgttaagtgtgacgcgttt
gcaggttgtggtgctggctcggctgtgaaggttgatgatggttctgtttataaggaaaat
ggcaagattgactttggtgaatggtataaagacgatctagagctctcagtcgttaaactg
atcacgccagcttcatcagacagtgcgacaaccgctaagcgcggaccatcatttgctgat
ggtgatgatggtttttatagagcgaacttatcggtatttacgtcgacagcagcgcgtata
ttgttaggtgccggtactgaaattgatgctgcttccgtcggtgccgcaagtacccaagtt
atccaacagcttgtcggtgatgttagcctggttgccgcacttgcgaatgacttgtcatta
ggtggtgcaattgactttacgagtgtcgatggcagtgaaaagcttgacgcaggtgccttg
gtactgatccaggttgcctcgtctttacagtctttagctggtaaagacggtcgtcctctg
ggagaggttttgactgagctttcagccgatgttgaaacaggtaatttggctaacagccag
acatttactcgccttaaagatgaagccaaaaaagcaggtaatgttttaagggctgttgtt
tcgggtgatcaagcggccatcaaagctgcattggtcgaagctggcgtttctgaagaggat
atagatgctgttgcagcagatattgagagtgcggtggatactgcggtcaataatggtgcg
acatctgaagatgacttgaaagatgacatcgatacagttgtagatcagcttgacgatatc
ggtaatggagatgcttcttctgataaacaaagtgaggcgatactggctagtgtggcgagc
agccaaaccgcacttgcaggcagcgatacgactttagctgggtttgccacttcacttgaa
accgtcaagggattgggtgccgatctgtccacaaaagaaaaagccattgagtatagtgct
gctgctactgtgttgagtacacagtatacagctgcaataaacctagatgcagatggtgat
aacctgggtaagctgttggccagagaatttgcaacggctgagcagctggtttcagcagcg
acgcagcttgtgacgcaaaatgctaagtaccagcctaccttagaccaggccaatgcgttg
ttgacgcaagttacagctttgattgcacaacgagaccaactaagcactgatattgcggct
gaactggctgctgcaaaggcaaaaattgatgagtatggggctgcccttgatgccgctaag
aaggcgtcagatgatagcctagtggttgccaacactgataagcaagtggctgatgagaaa
aaagccgcgtttgaaacacagcagctggttgcagagaacgcggttaaggcgataacggat
caagactccgcggtattggcactggcagaattgaacaaagcgcaagcggcgcttgcagaa
gcgcttactgcgtacaataatgctgagacctcggccaacaccgcgttgacattagcaaat
gcctataaggctgaagctcaaaaccagggtgagtcaacagacagcgcagatctggcgatt
gctcaggcaaatatactgattgacggcgcaaaggccgcattaatcagccttgacgcatcg
cgtaccaagctgagcatttattccaacactgcgcttggtaaacagggctccgataaattg
gtcaatattagctttgtgaccaaagaaggtgcagatgcgatttttaatgcaggtgagatt
ttatacgatgtggtgagggatatttgggattcgggtctggacactggtaaacactcaggc
acggcaccaaacttccctaactgggcttacagttatgacacggatgattttgagcttaag
ttgaaaaacacccaaggtgatgagcagatagatgcagtttatcagattacttctgcagga
agtacaagcagggttgtattgacttggtcaggcttattgacggcggattcaggccagaaa
attgagatccagaaggcggatctcggagcgtgcgacgcatgggcagtgagtaataacgga
ataccaaacgcatcttgctcagtgttgtatgtggaaggtagtatcagcaaaattgaagat
gtagaaagtgtgacgcacgctaagaccttcaatgtggttgagtttgttgatggccaatac
ggatttaagggttccttctcatctgatgcgactgcagttgatgctcagggcaaccctgtt
gcactattcacggatggtgctattgagcttgcagatgtgacattgtcaggcagaagtgaa
gatactgacttcacagctcattttgacttgcgtaatgaaagcggcagcaatgatttaggg
ttagctaacatcatgttagataactttaacggatacgcattcaaggtcagcttaatcgat
gagtcgggcccgctacttggtaacgtttcactcaacaatgatacgaacattccggccata
gttggtaatgtggaggagataaccaatggtttccgcatcgattatatcaacggagagtca
atcgaatacacagatattgattttttaggccagtccaataactaa
DBGET
integrated database retrieval system
