Pseudoalteromonas viridis: J5X90_15040
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Entry
J5X90_15040 CDS
T07232
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J5X90_15040 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvb01007
]
J5X90_15040 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvb03016
]
J5X90_15040 (serS)
Enzymes [BR:
pvb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
J5X90_15040 (serS)
Amino acid related enzymes [BR:
pvb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
J5X90_15040 (serS)
Transfer RNA biogenesis [BR:
pvb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
J5X90_15040 (serS)
Prokaryotic type
J5X90_15040 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF3450
DUF948
YjeF_N
CDC37_N
DUF7615
BLOC1_2
BAR_4
DUF3323
DUF4110
Motif
Other DBs
NCBI-ProteinID:
QTL34839
LinkDB
All DBs
Position
1:complement(3425528..3426817)
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AA seq
429 aa
AA seq
DB search
MLDAKYLRQDIEEAAARLKKRGFELDVAAINALEEKRKTLQTKTQELQSERNSRSKAIGQ
AKAKGEDVQPLLDAVADLGDQLSAAKAEQDEVLAQLQDIAATLPNLPAEDVPVGADESEN
VEISKWGEPKTFDFEVKDHVDLGEALGKGLDFETGVKLSGSRFTVMRGGIARLNRALSQF
MLDTHTDKNGYTEMCVPYLVNKASLYGTGQLPKFAEDLFHTEALSEDQDGYSLIPTAEVP
LTNCARDEIFDEKELPVRMTAYTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDS
MAALEELTGHAEGILQALELPYRKVVLCTGDMGFGAAKTYDLEVWLPAQNTYREISSCSN
MQDFQARRMQARFRRAGEKKPELLHTLNGSGLAIGRTLVAILENYQQADGSIVVPTVLRP
YMGGLEKIQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgcaaagtatttacgccaggacattgaggaagcagcagcgcgtttgaaaaaa
cgtggctttgagcttgatgtggcagcgattaatgcgctggaagaaaaacgaaaaacactg
caaaccaaaacgcaggagctgcaaagtgagcgcaatagccgctccaaggcaataggccag
gccaaggcgaaaggtgaagacgtacagccactactggatgctgtcgcagacttgggcgat
cagcttagcgctgcaaaagcagagcaagatgaagtattggctcagttgcaagatatcgcg
gcaactttacctaacctgccggccgaagatgtgccagtcggtgctgatgaaagcgaaaac
gttgaaatcagcaaatggggcgagcctaaaacattcgactttgaagtaaaagatcacgtt
gatcttggtgaagcgctgggcaaaggccttgactttgaaaccggtgttaaactcagtggc
tcacgctttacagttatgcgtggcggcattgcgcgtctgaatcgtgcattgtcacaattt
atgcttgatacgcacacagataaaaatggctacactgaaatgtgtgtgccttacctggtt
aacaaagcaagcctttacggtactggacagctgcctaagttcgcagaagacctgttccat
acagaagcgttgagcgaagatcaggatggttacagcttgatcccaaccgcagaagtgccg
ctgaccaactgcgcacgtgacgaaatcttcgacgagaaagagctaccggttcgcatgact
gcgtacacaccatgtttcagaagtgaagcgggcagctatggccgtgatacccgcggtctt
atccgtcagcatcagtttgacaaagtagaactggttcagctggtcaagcctgaggattca
atggccgcgctggaagagctcacaggtcacgcagaagggatcttacaagcgctggaactg
ccatatcgtaaagtggtactgtgtaccggtgatatgggctttggtgcagctaaaacctac
gacctggaagtttggttgccagcacaaaatacctatcgtgaaatttcttcttgttcaaat
atgcaagatttccaggcgcgtcgtatgcaggcgcgtttccgccgtgccggtgagaagaag
cctgagttgctgcacacactgaacggttctggtctggcaattggccgtaccctggtagca
atattagaaaactatcaacaagcggatggttctattgtagtgccaactgtactaagacct
tacatgggtggtcttgaaaaaattcagtaa
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