Pseudoalteromonas viridis: J5X90_15235
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Entry
J5X90_15235 CDS
T07232
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
J5X90_15235 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_CcmH_CycH
TPR_7
PDDEXK_3
DUF7129
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QTL34875
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Position
1:complement(3465107..3466270)
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AA seq
387 aa
AA seq
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MIELLFLLLPVAAAYGYVMGKNSAKNQAHEQNRKITSEYSKGLKFLLDREEDQGLEHLIK
LLEVSADSVEHYLILATLFRKRGELDRAIRIHELLLKQPSLDIQVIQSCKLALAEDYIMA
GLLDSAEEHLVELVKADYEEALMPIIQLYSQTREWQKGVSMYESHADLFTEQVYCAAIAN
FYCEAALEYQASENQSPDHSTDYLERALKLPKTTIRPLYELGHDALGKEDNVKAIYYWRK
LVSQFPCAIPLVLQDLQVCYQRLNIEHEFHALVNDLLKTSGVLVKIKHCEGLVEAGHTQQ
AVAYLTDSLKREPSIRGFSFLLKLLATKQDKFQSVLNEVDNLVSAYVATKPDYQCRNCGF
TSHKLYWLCPSCKSWESILPSQGVDGY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgattgaactacttttcctattgcttccagtcgcagctgcttatggctacgtcatgggg
aaaaacagcgccaagaatcaagcccatgaacaaaaccgaaaaattacctcggagtacagc
aaaggattaaagtttcttttagatagagaagaagatcagggccttgagcacctgataaaa
ttattagaggtcagtgctgactccgttgagcactaccttatactcgccaccttattccgc
aaaagaggtgagctcgaccgggccatccgcatccacgaactacttctaaagcagccaagt
ctggacattcaggtgattcaatcttgtaaactggcgctagcagaagattacattatggct
ggtttactagacagcgccgaggaacatttggttgagctggttaaggctgactatgaagag
gctttgatgcctattattcagctgtattcgcaaacccgggagtggcaaaaaggcgtgagc
atgtacgaaagccacgcagatctatttaccgaacaagtttattgtgctgccattgccaat
ttttactgtgaagctgcgctggagtatcaggcttcagaaaatcaaagcccagatcattcc
accgactatctggagcgcgcactcaagctgcccaaaacgaccatcagacccctttatgaa
ttggggcatgatgcgcttggcaaagaagataacgtgaaagccatttattactggcgtaaa
ttggtatctcagtttccttgtgccatcccgcttgtactgcaagatctccaggtgtgttac
cagcgccttaatatcgagcatgagtttcatgcgctggtcaatgacttgctaaaaaccagt
ggtgtactggtaaaaataaaacactgtgaggggctggttgaagctgggcatactcagcag
gcggttgcttaccttactgacagcctgaaacgtgagccttctattcggggattcagtttt
ctgctcaagctgctggccaccaaacaggataagtttcagtccgtattaaatgaagtagac
aacctggtatctgcttatgttgcaactaagccagattaccagtgtcgaaattgtggcttt
accagccacaaactctattggttatgtccctcctgtaagtcttgggagtcaatcttgcca
agtcagggtgtggacgggtattaa
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