Pseudoalteromonas viridis: J5X90_16055
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Entry
J5X90_16055 CDS
T07232
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00020
Citrate cycle (TCA cycle)
pvb00190
Oxidative phosphorylation
pvb00650
Butanoate metabolism
pvb00720
Other carbon fixation pathways
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01200
Carbon metabolism
Module
pvb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pvb_M00149
Succinate dehydrogenase, prokaryotes
pvb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J5X90_16055 (sdhA)
00650 Butanoate metabolism
J5X90_16055 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
J5X90_16055 (sdhA)
00720 Other carbon fixation pathways
J5X90_16055 (sdhA)
Enzymes [BR:
pvb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
J5X90_16055 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
QTL35020
LinkDB
All DBs
Position
1:complement(3651725..3653497)
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AA seq
590 aa
AA seq
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MKYNVREFDAVVVGAGGAGMRAALAISESGKTCALISKVFPTRSHTVSAQGGITVALGNS
HEDNWEWHMYDTVKGSDYIGDQDAIEYMTKTGPEAITELENMGLPFSRFENGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKNKTNVFSEWYALDLVKNDKGDVVGV
TAIDIESGEVVYFKSKAVVLATGGAGRIYASTTNAHINTGDGVGMAVRAGISMQDMEMWQ
FHPTGIAGAGTLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARAMMTEIREG
RGCEGPWGTHIKLKLDHLGEEMLNLRLPGVCDLSKTFAHVDPAKEPIPVIPTCHYMMGGV
PTNVNGQVLNVNENGEERIIEGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGNFLG
TYLQGFESTGDASSDDVEQAFARFNRWESSEKGKGEDPVQIKKDLQECMQLNFSVFREGD
AMADGLKELKEIRERLKFARLDDKSTEFNTQRIECLELDNLMETAYSTAVAANFRTESRG
AHSRFDFPERDDENWLCHSLHHPESDTMTKREVNFAPKTREAFPPKARTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatataatgttcgtgaatttgacgctgttgtagttggcgccggtggtgctggcatg
cgtgcagcgcttgcgatttctgagtcaggcaaaacttgtgcattgatctctaaagtattc
ccgacacgttctcatacggtatctgcacagggcggtatcacagttgcactgggtaactcc
cacgaagacaactgggaatggcacatgtacgacacggtaaagggttctgactacattggt
gatcaagatgccatcgagtacatgaccaaaaccggtcctgaggcaatcactgaacttgaa
aacatgggtctgcctttctctcgttttgagaacggccgtgtttatcagcgtcctttcggt
ggtcagtctaagaattttggtggtgagcaggctgcacgtacggcagcagcggcagaccgt
acaggtcacgcattgctacactgcttgtaccagcaaaacgttaagaacaaaactaacgtt
ttctctgagtggtacgcacttgatttggttaaaaacgacaaaggcgacgtagtcggtgtt
actgcaatcgacatcgaaagcggcgaagttgtttacttcaagtctaaagcggttgttttg
gcaaccggtggtgcgggtcgtatctacgcatcaaccactaacgcacacatcaacactggt
gacggtgttggtatggcggttcgtgctggcatctctatgcaggacatggaaatgtggcag
ttccacccaaccggtatcgcaggtgcgggtacgctggtaacggaaggttgtcgtggtgaa
ggtggttaccttctgaataaagacggtgagcgtttcatggaacgttacgcgcctaacgcg
aaagatcttgcgggtcgtgacgttgttgcgcgtgcaatgatgaccgaaatccgtgaaggc
cgtggttgtgaaggcccttggggtactcacattaagcttaaacttgaccaccttggtgaa
gaaatgcttaacctgcgtctgcctggcgtatgtgacctgtctaagacatttgctcacgtt
gacccggctaaagaaccaattccagttatcccaacctgtcactacatgatgggtggtgta
ccgaccaacgtaaatggtcaggtactgaacgtgaatgaaaacggcgaagagcgcatcatt
gaaggtctgttcgcggttggtgaaattgcgtgtgtatctgtacacggtgcaaaccgtctg
ggtggtaactcactgcttgacctggttgtattcggtcgtgcggctggtaacttcctgggt
acttacctgcaaggcttcgagtctacaggtgatgcatcttctgacgacgttgagcaggca
tttgcacgctttaaccgttgggagtcttctgaaaaaggcaaaggcgaagatccggttcag
atcaagaaagatctacaagaatgtatgcagcttaacttctcggtattccgtgaaggtgac
gcgatggctgatggtcttaaagaacttaaagagatccgtgagcgtcttaagttcgcgcgt
cttgacgacaagtcaactgagttcaacacccagcgtattgagtgcttagagcttgataac
ctgatggaaacagcttactcaacagccgttgcagctaacttccgtacggaaagccgtggt
gcacactcgcgctttgacttccctgagcgtgacgatgagaactggctgtgccactctttg
catcacccagagtcagacacgatgactaagcgtgaagtaaactttgcgcctaagactcgt
gaagcattcccaccgaaagcacgtacatactag
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