Pseudoalteromonas viridis: J5X90_16110
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Entry
J5X90_16110 CDS
T07232
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J5X90_16110 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_16110 (msbA)
Enzymes [BR:
pvb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
J5X90_16110 (msbA)
Transporters [BR:
pvb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J5X90_16110 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_29
AAA_24
AAA_16
MMR_HSR1
MCM5_C
AAA_25
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QTL35031
LinkDB
All DBs
Position
1:complement(3661066..3662808)
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AA seq
580 aa
AA seq
DB search
MQQSAKQIYKRLLSYTFDFKVPALFAIIGMLGYAAMDALFVQLMQPFIDDGLTERNAEVL
KMAPIVVVLLVIGRGIFNYMASYCLSYVGSQVVRKLRQSLFEHMLFLPVSFHDQHSNGEM
ISKITFDTEQVQQAVTRALQVMIREGAFVLFLLVVMFNASWQLSLIFLVVIPIVGVIVNL
VSKRFRKISKNIQDAMGEVTRSSEQMLAGHKVIHGFGGQDKEITHFADVNNRNRQQRVKM
DATRALSVSVIQIIAASAMALILAIIAMPEMIDTISSGTFVSLTTSMMMMLRPLKQLANV
NSDLQRGIAAATSIFEILDKEQEKNTGKLEADSVKGEIAVSGVTFRYPGKDEAVIKSLSL
QIPAGQSIALVGRSGSGKSTLSNLLPRFYDWDEGEITLDGVKLQDYTLSSLRKQFALVSQ
QVVLFNDTIANNIMYGLERAYTQEELEQVAKQAHVWEFVKDLPEGLNTMVGENGVMLSGG
QRQRIAIARAIVKNAPILILDEATSALDTESERLIQQALDNLMKDKTSIVIAHRLSTIEQ
SDCIYVLDQGRIVEQGKHQALLEQKGIYAALCQMQYGEQA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaatccgccaagcagatctacaagcggcttctgagttacaccttcgattttaaa
gtgccggccttgtttgccatcattggcatgctcggttacgccgccatggatgcgctgttc
gttcagttaatgcagccgtttattgacgatggcctgacagagcgcaacgccgaagtgtta
aaaatggcacccatagtggtagtgttgctggttattggacgtggtattttcaactacatg
gcatcgtattgtctgagctatgtgggctctcaggtagtaagaaagctgcgtcagtctttg
tttgaacacatgctgttcttgccggtaagttttcacgaccaacactccaacggtgaaatg
atctcaaaaatcacctttgatacggaacaagtacaacaggcagtgacccgcgctttgcag
gtcatgatccgcgaaggggcctttgtgctgtttttgctggtggtcatgttcaacgccagc
tggcaattgtctttgatattcttagtggttattcccatcgtcggcgtgatagtgaacctg
gtctccaagcgctttcgtaaaatttcaaagaatattcaggatgccatgggcgaagtaacc
cgtagttcagagcaaatgctggccgggcataaagtgatccatggtttcggtggtcaggac
aaagagataactcactttgccgatgtgaataaccgcaatcgccagcaacgtgtaaagatg
gatgcaacgcgcgcactgagcgtgtcggtgatccaaattattgcagccagcgccatggca
ttgatcctggctatcatcgcgatgccagaaatgatagacaccatctcgtcgggcaccttt
gtgtcgctgacgacctctatgatgatgatgctcagaccgcttaagcagctggcgaatgtg
aacagtgatttgcagcgcggcattgctgcggcgaccagtatttttgaaattctggataaa
gagcaggaaaagaacaccggcaaacttgaggcggacagcgttaagggcgaaattgcggtt
tcaggcgtaaccttccgttacccgggcaaagacgaagccgtcattaaatccttatcatta
caaattccggctggccagagtatcgcgctggtgggccgcagtggttcaggtaagtcgact
ttatcaaacctgctgccgcgtttttacgactgggatgaaggggagatcaccctcgatggg
gtgaaacttcaggactacacgctgtcgtcgctgcgcaaacagtttgcactggtgtcacag
caggtggtgctgtttaacgacaccattgccaataacattatgtatggactggagcgcgct
tacactcaggaagagcttgagcaggtcgcaaagcaggcccatgtctgggagtttgttaaa
gacttgcctgaggggttgaatactatggtgggtgaaaacggtgtcatgctttccggcgga
cagcgccagcgtattgccatcgcccgtgcaattgttaaaaacgcgcccattttgattctc
gatgaagcgacttctgcattggatacggagtcagagcgtttgatccagcaggcactggat
aatctgatgaaagataaaacctccattgtgatagcacaccgcctgtcgaccatagagcaa
tccgattgcatttatgtgctcgatcagggacgcattgtcgagcagggcaaacaccaggca
ctgcttgagcaaaagggcatttatgccgcgctatgtcagatgcaatatggtgagcaggca
tga
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