KEGG   Pseudoalteromonas viridis: J5X90_16215
Entry
J5X90_16215       CDS       T07232                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pvb  Pseudoalteromonas viridis
Pathway
pvb03030  DNA replication
pvb03430  Mismatch repair
pvb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J5X90_16215
   03430 Mismatch repair
    J5X90_16215
   03440 Homologous recombination
    J5X90_16215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvb03032]
    J5X90_16215
   03400 DNA repair and recombination proteins [BR:pvb03400]
    J5X90_16215
Enzymes [BR:pvb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J5X90_16215
DNA replication proteins [BR:pvb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J5X90_16215
DNA repair and recombination proteins [BR:pvb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J5X90_16215
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: QTL35052
LinkDB
Position
1:complement(3688164..3688871)
AA seq 235 aa
MAMQGDILSWPNRFAHLARQSSDERLRAFYTAGVQAPDTPVSQAQFVALDFETTGLNYET
DDIVSVGLVPFDARRAYCRDARHWILKPSTPLHEESVVVHQITHSQVSEAPDLDAILEEL
LACLAGKVIVVHYRHIERPFFNQALMQRLGEGIEFPLIDTMALEHRIETNRLTLWQRIKR
QPIPSIRLADSRKRYGLPYYVAHHALSDALATAELFQAQLQHHYTQHTDIKSLWM
NT seq 708 nt   +upstreamnt  +downstreamnt
atggcaatgcaaggcgacattttatcctggcctaaccggttcgcccatttagcgcggcaa
agtagtgatgagcggctcagggcattttataccgcgggcgtacaggcgcccgacacgcca
gtgtctcaggctcagttcgtggcactggattttgaaaccaccgggctgaattatgaaacc
gatgacattgtcagcgtcggtctggtgccttttgacgcgcgacgagcctattgccgcgac
gccaggcattggatcttaaagccctctacgccactgcacgaagaatcggtggtggtgcat
cagataactcattcgcaggtcagtgaagcgccggacctggacgccatactggaagagctg
ctggcttgtctggcaggcaaggtcattgtggttcattaccgccatattgagcggccgttc
tttaatcaggcgctaatgcaacggctgggcgaagggattgaatttccattgattgatacc
atggcgctggagcatcgcattgaaaccaaccggcttacgctgtggcagcggataaaacgc
cagccgatcccgtctattcgcctggccgacagccgcaaacgttatggtctgccttactat
gtggcgcatcacgcactcagtgatgccctggcgacggctgagttatttcaggcacaactt
cagcaccactacacgcagcacacagacatcaagtcgctgtggatgtga

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