Pseudoalteromonas viridis: J5X90_16670
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Entry
J5X90_16670 CDS
T07232
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03030
DNA replication
pvb03430
Mismatch repair
pvb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5X90_16670 (dnaX)
03430 Mismatch repair
J5X90_16670 (dnaX)
03440 Homologous recombination
J5X90_16670 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvb03032
]
J5X90_16670 (dnaX)
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_16670 (dnaX)
Enzymes [BR:
pvb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5X90_16670 (dnaX)
DNA replication proteins [BR:
pvb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5X90_16670 (dnaX)
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5X90_16670 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
TIP49
AAA_30
AAA_18
AAA_assoc_2
AAA_7
PIF1
AAA_19
AAA_2
TsaE
Rad17
Mg_chelatase
nSTAND3
Herpes_Helicase
RCF1-5-like_lid
SKI
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QTL35137
UniProt:
A0ABX7V6S3
LinkDB
All DBs
Position
1:complement(3804041..3806572)
Genome browser
AA seq
843 aa
AA seq
DB search
MSYQVLARKWRPQSFHEMMGQEHVKQALINALNEQRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEVGITSTPCGQCSACEEIEAGKFIDLIEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPITILSRCLQFNLNAMAQ
SQIVTQLAQILPQESVNFEQTALEVLAKAADGSMRDALSLTDQAIAQTNGELNLPAVQQM
LGLMDSSHAVLLMAAVLSQDGETLLAEVADIALKNGNFASVLDDLISLLHLVQLTQLVPQ
AANFGQFEAEQVKTLAQQLTPQDTQFMYQLLLAGKKDLSWAPEPRLGFEMIMLRLLAFER
ADFSQAGGPAPAGAVKNPGKVGKLRDMLSAKQRGPQAQLSTPAPQQNSAHAQQSPAPVKP
APAQQPKAQAAPQQTYTPEQPAQQPNAQAAPQQAYTPEQPVQQPNAQAAPQQVYTPEQPA
QQTASQQPIPSAEQMNAEPAHTAPPEQSPEDVSIEQQYQDIMAQAESQGYEQHQSEPAHQ
PVPAQQQHSTPQRETQAPEHTPVQQLAQKQQQAQSAIARILQNRQISGAGRLLGGEGEAK
KSEPQQGAGTVPGAVAPGRRLPHAPRADDSQQSAQHWAQSQEQIPEQPQRAFQPSAPQRK
VKKPEMAERFKKDESKLAPELLEQLAPQAPGEQETQDTTLDIPAPENFVSPISDIKFAHQ
KDDWAQMIEQMQLGGRVRQFALHAMFNQQGQHCTLQVEQSQQHLDSSMLREKLHESLAEQ
LNEPVELNIEFVDAVNNTPFLIQQDIDQQRYLQAVDAVNNDPVIQAFAREFEASVDEKSV
RAL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctggcgcgtaaatggcgtccacagtcgttccacgaaatgatggga
caggagcatgttaagcaggcactcatcaatgcactgaatgagcagcgactgcatcatgcc
tatctgtttaccggcacgcggggcgtgggcaaaacaaccattgcgaggatctttgccaag
agcctgaattgtgaggtggggatcacctccacgccgtgtggccaatgtagtgcgtgtgaa
gagatcgaagccggtaagttcattgatcttatcgagatagatgcagcatctcgcactaag
gtcgaagataccagagagattctcgacaacgtgcagtatgcgccaacgcgtggtcgctac
aaagtgtacctgattgacgaagtgcacatgttgtctaagcacagctttaatgctttgctg
aaaaccctggaagagccgccggagcacgtcaagtttctgctggcgaccacagatccgcaa
aaattaccgatcaccatattatcgcgctgtttgcagtttaaccttaatgccatggcgcag
agtcagatagtaacccagctggcgcaaattttgccccaggagtctgttaacttcgagcag
acagcactggaagtactggcaaaggccgcagacggcagtatgcgtgatgcattgagcctc
accgatcaagcgattgcacaaacgaatggtgagctgaacttaccggctgtgcaacaaatg
cttggcttgatggacagcagtcatgccgtattactgatggccgccgtgttatcgcaagac
ggcgaaaccctgttggcagaagtggcggatattgctttgaaaaatggcaacttcgccagc
gtgctggatgatctgatcagcctgctacatcttgtacagcttacgcagctggtgcctcag
gctgccaattttggtcagttcgaggctgagcaggtaaaaacactggctcagcagctaaca
ccgcaggatactcagtttatgtaccagttgctgctggcgggtaaaaaagacttaagctgg
gcacctgaacccaggcttggttttgaaatgatcatgctgaggttactggcgttcgagcgc
gccgatttttctcaggctggcggccctgcacctgcgggcgcagtaaaaaatcccggcaaa
gtcggcaaactgcgggatatgttaagtgccaaacagcgtggtccgcaggctcagctcagc
acgcctgcaccacagcaaaattcagcgcacgcacagcaaagccccgcgcctgtaaagcct
gcacctgcacagcagccaaaggcacaagctgctcctcagcaaacttatacgcctgagcaa
cctgcacagcagccaaatgctcaagctgctcctcagcaagcttacacgccagagcaacct
gtacagcagccaaatgcacaagctgctcctcagcaagtttacacgcctgagcaacctgct
cagcaaactgcatcacagcagccgataccatcagctgagcagatgaatgctgaaccggca
cacacggcaccgcctgagcaatcaccggaagatgtctcgattgaacaacaatatcaggac
atcatggcgcaggccgaatcacaggggtatgagcagcatcagagcgagcctgcgcatcag
ccagtgcctgctcagcagcaacatagtacgccccagcgggagacgcaagcaccagagcac
acgccagtgcaacagctggcgcaaaagcagcaacaggctcaatcggccattgcccgcatt
ttacaaaatcggcagatctccggggctggcaggttgctgggaggagagggcgaagcaaaa
aagtctgagccgcaacagggagctggcacggtgcccggcgctgttgcgccaggcagaagg
ttgccacacgctccgcgtgctgatgatagtcagcaaagcgcacagcactgggcgcaatca
caagagcagatccctgagcagccgcagcgagctttccagccttcagccccgcagcgtaaa
gtcaaaaagccagaaatggcagagcgctttaaaaaagacgaaagcaagctggcacctgag
ctgcttgagcagttagcaccgcaagcgccgggtgagcaggaaactcaggacacaactctg
gatattcctgcaccagagaactttgtcagcccaatcagtgacattaaatttgcccaccaa
aaagatgattgggcacagatgattgaacaaatgcaactgggcggtcgggtcaggcagttt
gcgttgcatgccatgttcaaccagcaaggccagcattgtactttgcaggtagagcagagc
cagcagcatctggattccagtatgctcagagaaaaattgcacgaaagcctggctgagcaa
ctcaatgagccggtagagctaaatattgaatttgttgacgcagtgaacaacacgccattt
cttatccagcaggatattgatcagcagagatacctgcaggcggttgatgcggtcaataac
gatcccgtgatccaggcctttgcccgtgagtttgaggcctcggtagacgaaaaatcggta
agggcattgtaa
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integrated database retrieval system
