Pseudoalteromonas viridis: J5X90_16970
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Entry
J5X90_16970 CDS
T07232
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_16970
Transporters [BR:
pvb02000
]
Other transporters
Pores ion channels [TC:
1
]
J5X90_16970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_14
ANAPC3
TPR_7
TPR_12
TPR_19
Fis1_TPR_C
TPR_6
Motif
Other DBs
NCBI-ProteinID:
QTL35190
LinkDB
All DBs
Position
1:3868517..3870403
Genome browser
AA seq
628 aa
AA seq
DB search
MTEFIFIRPTLLWLLLPWLLLTGVQWLKRHRSNDEQLIAPHLAQVVLEDGPRKQSKSTPW
LVSLLLLLSILAAAGPSFEKHTVPVFKSKQARVLVMDMSYSMFATDIQPNRLTQARFKTL
DMIEQFTEGDTALVAYAGDAFVVSPLTDDVKTLANLVPSLSPDIMPSKGANVLAGLDQAK
TLLDQAGYTEGEIILISDEVEQEELADIADLLNGTGYRLHVYGIGTPDGAPIGLPEGGFL
KDRYGQIVVPKLYPERLSALASRLGGRYATYTPSDSDIKTFAPAKVTDLDSNEQPGETLW
HLDAGKYLLFVIVPLALWLMRSQPLTLGLLVVALLQPQVGYSADWTSWFKNQDQQALESY
QQGDFEQAQAADNPLLKGTALYKAGDYERAAEQLKHTTSATGQYNYGNALAKSGQLDQAI
AAYEQALQLDPDFKQAQENKQLVESLKEQQQQSQQQNGDQSDDQEQSGDQQDQQQSDQQQ
DGEQQSEQQNEQSSSQSDSEQQSDASQSDTQNQQNAESQKTPESDNDNAPELAQPQQQEA
QDQQAEQAAQQMQQAQQQATEEESQPQGTQQMMQSRPLTPEEKEKAQQLDQLLRKVPDDP
AILLRNKMLLESQQRVRQRRPRGVEKSW
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttatttttatccgtccaacgctattatggttactgctgccctggctactg
ctaacgggagtgcaatggctgaaacgacatcgcagtaacgacgaacaattaatcgcccct
caccttgcgcaggtagtgctggaagatggtccgcgcaagcaaagtaaaagtacgccctgg
ctggtgagcctgttattgctgctgagtatattagccgcagccggacctagctttgagaag
cacacagtcccggtgttcaaaagcaaacaggcccgggtgttggtcatggatatgtcttac
tccatgtttgccaccgacattcagcccaaccggctcactcaggcccgctttaaaacgctg
gatatgattgagcagtttaccgaaggcgacaccgctttggttgcatacgcaggagacgcc
tttgtggtatctccgctgactgatgatgtcaaaaccctggccaacctggtacccagcctg
agcccagacatcatgcccagcaaaggcgctaatgtgctggcagggctggatcaggctaag
actttgctggatcaggccggttacactgaaggggaaattatcctgatcagcgacgaggtc
gaacaggaagagctggcagatatcgcagacttgctaaatggcacaggttaccgactacac
gtttatggtattggcacgccagacggtgcgccaattggcctgcctgaaggcggttttttg
aaagaccgctatgggcagattgtggtaccgaaactatatcctgagcgtctgtctgcgcta
gcctcgagactcggtggtcgctatgcgacttatacccccagtgacagtgacatcaaaacc
tttgccccagccaaagtgaccgatctggacagtaatgaacagccaggtgaaacgctatgg
cacctggatgcgggtaaatatttgttgtttgtcattgtgccgctggcgctttggctgatg
cgctctcagccgctcactttgggattgcttgtggttgcgttactgcaaccacaagttggg
tatagcgcagactggaccagctggtttaaaaatcaggatcagcaggcactggaatcgtat
cagcaaggcgactttgagcaagcccaggccgctgacaacccgctgttgaaaggcaccgca
ttgtacaaagcaggtgattatgagcgcgcagccgagcagcttaagcacaccacatctgcc
accgggcagtacaactatggcaatgcactggccaagtcggggcaactcgaccaggccatt
gcagcctatgagcaagccctgcagctggaccccgactttaaacaggcgcaggaaaataaa
caactggtcgagagcctcaaggagcaacagcagcagtctcagcaacaaaatggcgaccag
tctgatgatcaggagcagtcaggtgaccagcaagatcaacagcaaagtgaccagcagcaa
gacggtgaacagcagagcgaacaacagaacgagcagtcgtcttcgcaatctgactctgag
caacaatcagacgcgtcacaaagtgacacacaaaaccagcaaaacgctgagtctcagaag
acgccagagtcagacaatgacaatgcccccgagcttgcgcaaccgcagcaacaggaagcg
caggatcaacaagctgaacaggctgctcagcagatgcagcaggcacagcaacaagctact
gaagaggaaagtcagccacaggggacacagcaaatgatgcaaagtcgcccactgacacct
gaagaaaaagaaaaagcacagcaactcgatcagttactgcgtaaagtaccagacgatcct
gctattttgctgcgcaacaaaatgttattggaatcacaacaacgggtgcgtcagcgccgc
ccgcgaggagtagaaaaatcatggtaa
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