Pseudoalteromonas viridis: J5X90_17855
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Entry
J5X90_17855 CDS
T07232
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb02024
Quorum sensing
pvb03060
Protein export
pvb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
J5X90_17855 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J5X90_17855 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J5X90_17855 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvb02044
]
J5X90_17855 (ffh)
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
J5X90_17855 (ffh)
Secretion system [BR:
pvb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
J5X90_17855 (ffh)
Eukaryotic Sec-SRP protein
J5X90_17855 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
cobW
AAA_33
YqeC
AAA_31
AAA_26
APS_kinase
ATP_bind_1
TsaE
KTI12
AAA_14
AAA_30
T2SSE
AAA_16
AAA_24
ABC_tran
Thymidylate_kin
SurA_N
Motif
Other DBs
NCBI-ProteinID:
QTL35350
LinkDB
All DBs
Position
1:complement(4049132..4050511)
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AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVRDFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELNLAAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDISQKPVDIATNAILHAK
KKFIDVVLVDTAGRLHVDNEMMGEIKDLHAAISPIETLFVVDSMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFIGVGERTDALEPFHPDRVASRILGMGDV
LSLIEEVESKVDKDKAAKVAEKVFKGDGFTLEDFAEQLRQMKNMGGMMSMLDKLPGMSNL
PDAVKGQVNDKTFNQMEAIINSMTPHERARPEVIKGSRKKRIAAGSGTQVQDINKLLKQF
TQMQKMMKKMKGKGGMMKMMKNMKGMMPPGMFGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctccaagaacgcttaggaaaaacgcttaaaaacatcagcggccgcggc
cgactaaccgaagacaatattaaagaaacgctccgtgaagtgcgtatggcactgctcgaa
gcggacgtggctttgcccgtcgtcagagactttgttaagcaggttaaagagcgtgcagtg
ggtgttgaagtgactaagagcctgagtccgggccaggttttcatcaagatcgtacgtgaa
gaactcgaaaaagccatgggggaggccaatgaagagctgaacctggcagcgcaaccgcca
gcggttgtcatgatggccggtctgcaaggtgcgggtaaaaccaccagtgtgggcaagctg
gctaagttcttaaaagagcgtaagaaaaaatctgtgctggtagtcagtgccgacgtctac
cgtccggcggctatcaagcagctggaaaccttggccacagaagtagacgttgagttcttc
cccagtgatatttcgcaaaagccggtggacatcgcaacgaatgcgattttgcacgcgaag
aaaaagttcattgatgtagtgctggtggataccgcgggtcgtttgcacgtcgataatgag
atgatgggcgagatcaaagacctgcacgcagctatctctccgattgaaaccctgtttgtg
gttgactccatgacaggtcaggatgctgcgaatacggcgaaagcattcgacgaagcgctg
ccgctgaccggtgtgatcctgaccaaaacagacggtgatgcccgcggtggtgcggccctg
tctatccgtcatatcacaggtaaaccgattaagttcatcggtgtgggcgagcgcacggat
gcactagagccattccacccggatcgtgtggcgtcacgtattcttggtatgggtgacgtg
ctgtcattgatcgaagaagtcgagtctaaggttgataaagacaaagcggctaaagtggcc
gagaaagtctttaaaggcgatggtttcacgctcgaagactttgctgaacaactgcgccag
atgaaaaacatggggggcatgatgtcgatgttggataaattgcctggtatgtcaaacctg
ccggatgccgtgaaaggtcaggtgaacgataagacatttaaccagatggaagccatcatt
aactccatgacaccgcacgagcgcgcgcgtccggaagtgatcaaaggatcgcgtaagaag
cggatcgcggccggttcaggtactcaggttcaggatatcaataagctgctcaagcagttt
acccagatgcaaaaaatgatgaaaaagatgaagggtaagggcggcatgatgaaaatgatg
aagaacatgaaaggcatgatgccaccgggcatgttcggtggtggcggtccgaagttttaa
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