Pseudoalteromonas viridis: J5X90_18805
Help
Entry
J5X90_18805 CDS
T07232
Name
(GenBank) DUF3320 domain-containing protein
Organism
pvb
Pseudoalteromonas viridis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
AAA_12
AAA_19
DUF3320
AAA_30
ResIII
SLFN-g3_helicase
Viral_helicase1
Helicase_RecD
DEAD
AAA_10
nSTAND3
IstB_IS21
AAA_7
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QTL37794
LinkDB
All DBs
Position
2:complement(82884..87656)
Genome browser
AA seq
1590 aa
AA seq
DB search
MTIEQKLESARLELLDMGLRANPQLNYRSSGKAIDIIDEKSEQVFELLVEKEKTMSFLPL
PKAYQNNISDDDQSTFFQSDEDTELPPLDLYLEQQKGEARFSDKYLQTGFMPAKLDKALL
KLEADAHTMLQEQGIEVMYLALGFLQWNEPSNTRVSRYAPLILVPVKLTRSSARDSFKLK
YTGEELGSNLTLAAKLRTEFKLQLPTYTVETTLPDYYQAVAHAVEKQSSWKVHPDKIGLG
LFSFGKFQMYMDLDPSGWPEGKKPEQLPLMTRLLSEGFSPEAEYNTSELAHPEKLHLVKD
ADSSQIAAILAMKSGADFIIQGPPGTGKSQTITNIIAEAVALGKKVLFVAQKMAALEVVK
KRLDETHLGLAVLELHSHKSTKKVVLASISESLAQGKPQIADREQEFAELAAAKSLLDSY
AKEVRVPILNSKINYISALGKLMQLEQASTDKPIPLLPFSLFSQWTDETYHQVIKIVDEL
VQQIQQMGEPAAHPFAMSTRQDFSPAMHQALSAAMLALSDELSALDSHGQTVAERIQLER
PDSLQAVSQLISTAYWLSEVPELHEVQVDNSVWVSDEQQVVRGLESLERTMLLKKAVEEE
FIALVFEADLLSIREGLVGKTDKWWRFLSPGFRKAKTKLSGLYKGILPGNPAKWLESLDT
VLEYKSAKREFDTYCTFLSNAFGPLWQGEHSDLAELKRVFEWICDYYQKVNSGQLQLKLA
KVIDAGVDKQLLLNESDGLKRLHNESLHLCNRLTEIVAIEPQRSEYELATMKFGALSDLL
ASWNKPEQLYEFARYNQIITALEQYQIQPFVKLAFNWKEPPESLLHVFEKSYYQGLVDYA
YANSASIRQFDRTKHEKTIKEFKKVDEESLFFAQEKLVGQLFEQLPNKNAKGEMELVLRE
LSKKTRHIPLRKLLSEAGHVIQQIKPIFMMSPMSIATYLKQGALEFDLIVFDEASQIPAP
DALGAMMRGSQVIVVGDSKQMPPNSLFAKSVELEEEELEKSDTADIESILALMESKGAPS
HMLKWHYRSRHDSLIAVSNEQFYKNELIAFPSPGFHRDATGLKFHYLPESWYDKGGSRTN
PGEVKAVVAAVLKHALTKPHLSLGIVAFSLSQRDAIILELEKVRRLHPETDGFFERHAGG
DEFFVKNLENVQGDERDVIFISICYGKTKSGQISQNFGLLNKPGGERRLNVLISRARLSM
EVFSNFHGQELRVDSGSPFGLRALQAFLEFAEFNKSEMAVEGEQEANFAFGRVLQDAIQN
LGFDVAAQVGNQGYFIDLAIRHPSYPDQYVLAFEYDGEGYYEAVSARDRERLRQSVLEGL
GWKFARIWSTDWYRDPKSELQRLKVMIEEAILNHDAHLAALEGDTEQAAVLADTLSVTAE
IEEQGSVPVIQRNEVAEEAIFDACKIPYKKVDASELNMPKVDDFSAIPLSAIEHAIERVV
ASEYPIFASIVASRLANAAGLSRVGSKIKRIVDQAIDGLADKGAIQKDDNRVLWPKGVSS
VKLRNWDATDPSMKKLENVCDAELTNALLLTVRDAHAINMTDSASAALGLLGFQRATAQA
VERMNRLALEQCKKGVLTSENDRLKIAVRN
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgactattgagcagaaattggaaagtgcacgactggagttgcttgatatggggctgcga
gcaaacccgcagctgaactatcgtagcagtggaaaagcgatagatataatagacgaaaag
tctgagcaggtttttgagttgcttgttgaaaaagaaaaaacaatgagctttttgccatta
ccaaaggcttatcaaaataacatcagcgacgatgatcaaagtactttttttcagtctgat
gaagacactgagttacctccgctggatttgtatctggagcagcaaaagggggaggcacga
tttagcgataagtatcttcaaactgggtttatgcctgcaaagcttgataaggcactttta
aagttagaggcggatgcacacacaatgttgcaagagcagggcatagaagtaatgtaccta
gcgctgggttttttgcaatggaatgaaccgtccaatacgcgtgtatcgcgctatgcacct
ttgatcctggtccccgtaaagcttacaagatcgtccgccagggatagttttaagctgaaa
tatacgggtgaggagctgggctccaatctgacgctggccgcaaaattgagaaccgaattc
aaactacaattacctacttacacggttgaaactactttaccagactactatcaagcagtt
gcgcatgctgtcgagaagcaatcaagctggaaagtccacccggataaaatcggcctgggg
cttttctcgtttggcaaattccaaatgtatatggatttagatccgagtggctggccagaa
ggtaaaaagcctgaacagctgccgctcatgacacgtcttctgagtgaggggtttagccca
gaagccgagtacaacactagtgaattggcgcaccctgagaagctccatttggtaaaagat
gccgattccagccagatagcggcgattttggcaatgaagtcgggtgctgattttatcatc
cagggtccacctggtactggcaagtctcaaaccattaccaacatcattgctgaggctgtt
gctttgggtaaaaaagtgctgtttgtagcacagaaaatggcggcacttgaggtggtgaag
aagcgacttgatgaaactcacctcgggcttgccgtgctcgaattgcacagtcacaaaagt
accaagaaggtggtactggcttccatctcggagtcactggcacaaggcaagccccagata
gcagacagagagcaagagtttgctgagcttgctgccgccaaatcactactggattcctat
gcgaaagaagtgagagtgcccattctcaatagcaaaatcaattatatcagtgctttgggt
aagctgatgcagcttgagcaagcgtcaacggataaaccgatccccctgttgccatttagt
ctgttttcgcaatggacagacgaaacataccatcaagtaataaaaattgtcgacgaactg
gtccagcagatacagcaaatgggggagccagccgcgcacccgtttgccatgtctacccgc
caggatttttctcccgcgatgcatcaggcgttatccgctgcgatgctggcactgagcgat
gaattaagcgcattggattctcatggccaaacggttgcagagcgcatacagcttgaaaga
cccgacagcttgcaggcggtatctcaattgatttccactgcgtactggttgtctgaggtg
cctgaactgcatgaggtacaagtagataactcggtgtgggtttcggatgagcaacaggta
gtacgtggtctggagagtcttgagcgcaccatgttgcttaaaaaggcagtcgaagaagag
tttattgcacttgtatttgaggccgatttactgagtatccgtgaagggttagttggaaaa
acggataaatggtggcgctttttgtcgcctggttttagaaaagcgaaaactaagctttct
ggtctgtacaaagggattttgccgggcaaccccgcaaagtggttagagtcattagataca
gtgttggagtataaaagcgcaaaacgcgagtttgatacctactgtacgtttttatcgaat
gcttttggcccgctatggcaaggagagcactcagacctggcagagctcaaacgggttttt
gaatggatctgcgactattatcaaaaagtgaatagtggtcagttgcaattgaagctggca
aaagtcattgatgctggtgtagacaaacaactgctactgaatgagtcagacgggctaaaa
cgattacataatgagtcgttacacctttgcaatcgactaacagaaatcgttgcgatagag
ccacaaaggtcagagtatgaacttgcgacaatgaaatttggtgctttgtcagatctgtta
gcgagttggaacaagccagagcagttatatgagtttgcacgatataaccagataattact
gcacttgagcaatatcagatccagcccttcgtaaaactggccttcaattggaaagagccc
ccggaatctttgctgcatgtgtttgagaaaagctattaccagggcttggttgattatgcg
tatgctaactccgcatctatccgacaatttgatcggacaaagcacgaaaagaccatcaaa
gaattcaaaaaagtggacgaagaaagtctgtttttcgctcaggaaaagcttgtcggtcag
ttgtttgaacagttaccgaataaaaatgcaaaaggagaaatggaactggtactgcgggag
ctcagtaagaagacgcgccatattcctttgcgaaaattattaagtgaagcgggccatgtt
attcaacagattaaacctatctttatgatgagccctatgtctatcgcaacttaccttaag
caaggtgcgctggaatttgatttgattgtttttgatgaagccagccagatccccgctcca
gatgcattgggtgcgatgatgcgggggagtcaggtgatcgttgttggtgatagcaagcag
atgccacctaatagcttatttgcaaagtcggtggaattggaagaagaagagcttgaaaag
agtgatactgctgacatcgaaagcatactggcgctgatggagtctaaaggtgcgccaagc
catatgctgaagtggcattaccgttcacgccacgattcgttaatagccgtttcaaatgag
cagttttacaaaaatgagttgatcgcatttccgagccccggatttcaccgtgatgcaacc
gggctgaagttccattatttgccagagagctggtacgacaaaggggggtcaagaactaac
cccggagaagtaaaagcggtggtcgcagctgtgcttaagcacgctctgaccaaacctcat
ttatcgctcggtattgttgcttttagtttgtctcagcgcgacgcaatcattctggagctt
gaaaaagtgcgccgtttacaccctgaaactgatgggttctttgagcgccatgctggtggt
gatgagttttttgtaaagaaccttgagaacgttcagggtgatgagcgagacgtcatcttt
attagtatttgttatggaaaaacgaagtcgggccagataagccagaacttcggtttatta
aataaacccgggggagagcgcaggctcaatgtattaatatcaagggcccgattgtctatg
gaggtcttttcgaacttccacgggcaagagctcagagtggatagtggcagcccattcggg
ctgcgtgcattgcaggcgtttttagagtttgctgaattcaacaaatcagaaatggctgtt
gaaggcgagcaggaggcaaattttgcatttggtcgtgtactgcaagatgccattcaaaac
ttgggctttgatgttgcggcacaagtgggaaatcagggatattttattgatttggcaata
cgccacccaagttatcctgatcaatatgttttagcatttgagtatgatggcgagggctac
tatgaggcggtttctgccagggacagggagcggttgagacaaagcgtactagaggggtta
gggtggaaatttgcgcgcatctggtcaaccgactggtacagagatccaaaatcagagctg
caaagactgaaagtgatgattgaggaggccatattaaatcacgatgcacaccttgctgca
ctggaaggtgacactgaacaggctgcggtattggctgatacgttatctgtgactgcagaa
atagaggagcaaggctcagtcccggtaatacaaagaaatgaagtggcagaagaagcgata
tttgatgcatgcaaaatcccttataaaaaagtggatgcttctgaactcaacatgcccaag
gttgatgattttagtgctattccattaagcgctattgagcatgcgattgagcgagttgtg
gccagtgaataccctatttttgcttccatagttgcaagccgtttggccaatgccgcaggg
ttatctcgcgttggcagtaaaataaaacggattgtggatcaagctattgatggtttagcg
gacaaaggagcaattcaaaaagacgataacagggttctttggcccaagggcgtctctagc
gttaaattacgcaattgggatgccacagacccctcaatgaaaaagctggaaaatgtctgc
gacgctgagcttactaacgcgctattgttgacagtacgggacgcacatgcaatcaacatg
acagactcggcatctgccgcccttggtttacttgggtttcaacgtgccaccgcacaggct
gttgaaaggatgaatcgtttggcactagagcaatgcaaaaaaggcgtgctaaccagtgaa
aacgacagattaaaaattgctgtgaggaattga
DBGET
integrated database retrieval system
