Pseudoalteromonas viridis: J5X90_19530
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Entry
J5X90_19530 CDS
T07232
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_19530
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5X90_19530
Archaeal homologous recombinant proteins
J5X90_19530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
RsgA_GTPase
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTL37937
UniProt:
A0ABX7VDL7
LinkDB
All DBs
Position
2:complement(258692..262348)
Genome browser
AA seq
1218 aa
AA seq
DB search
MKLLGIQVQNLASLADADIDFTQPPLKDTGLFAITGDTGAGKSTLLDAICLALYGKTARL
KADAKNKVMLNGDELKLNDPRNLLRRGCVSGRAEVTFCGQDGNQYRASWRVGRARNKLDG
RIKEAEHQVVRLADDTVLASKTTEAKQLLEQLLGLNFEQFSRAVLLAQHEFAAFLKANSD
ERAQLLETLTGTAKFSVIGKAIFEHHKAKQDALAQRKQSLDHVTLLSDEALAENQQTAAQ
LTAAIAQAREEEKLLEQGINWYQACDKLAQQCHQAEQEQAQCQQHLSAQAQDFDRARRAK
AVEVIADNRAQARDTSVRLKQLDLDIGQLQQQDYAPQIRAAEEELQAAQGRLSEAKNQLQ
VCTPALQSLRELDQQREANKQLLAQSSAEYNALLEQHEVLQQRSEALDTQLNTDRQQLTQ
LQQACEADPALTQASEQWPQISGSLKQWQACQGQLNKLADEQHQAQLNADKDKQAQQALQ
PRLTEQNRQLADIQARLSATQSELNALDYETLQFQRTQLAQAQQNQSQRAQLQQELGEHR
LHIDRLRHQHHSLQQQLKDTEQQDELTRQRVLLTQENLQQVRFRASDNISTLRAQLVAGQ
ECMVCGSTEHPYGVEHIDSHWQTLIADFESQYQAAEQAREQTQQRYHALVGQAEQCNGQL
QAALQHEAQLNRKLTQIAEALAQLPAQLRDTDDPQAHLEQLDKKLQTYSQLSKTQQQLWQ
QQQACQHEIQQLEQQNQLLQSQLERAEQARAYGQTRQAELQTEQQEALAQVRQLYSAPQW
WHAFEQAPEQAITALGEQVRVRQQQQQQISQLQQKISEDEHTAQLLRQQCQDKQAQLDKA
AQARKALTDKGDALTRERVAIQPLEISADNWHQSLLDEQQQAEALQTQATQGLAQLRQAQ
ESQALTLAHKQQSQQQLQEALDKVQARYQSWLAELQTQFDSMTEDEVEALLQWDKSQWQA
LLDEHDALSKALHSAQNKHAHLQQELQTLRAEPVTEQSQAQLTERLAQLQQERDGSQAKL
ISVNALLKQHEDNKAYLAEQYEALEAQQAEYEHWHLLNRLLGDATGKTMRNLAQTQTLRI
LLQYANHHLCSLSKRYRLTVIGQSLEIAIIDRDMADEQRSVNTLSGGESFLVSLALALGL
ASLSSNQVQINSLFIDEGFGTLDPQTLSVALDALDALQSQGRKVGVISHVAEMTERVATQ
IKVQKQAGGYSSVTISER
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacttgggatccaggtgcaaaacctggcgtcactggcggatgctgacattgac
tttacccagccaccgttaaaagacactggcttgtttgccatcactggcgacacgggggct
ggtaaaagtaccttgctggatgcgatatgtctggcgctgtacggcaaaacggcccgactg
aaggccgatgcaaaaaacaaagtgatgctcaatggcgatgagctcaaactcaacgacccc
cgtaatttactgcgccggggctgtgttagtggccgcgccgaagtcactttttgtggtcag
gatggcaaccagtaccgcgccagctggcgggtgggacgcgcccgtaacaaactcgatggc
cgtatcaaagaagcggagcatcaggtggtgcgcctggctgatgacacggtactggccagc
aaaaccaccgaagccaaacagctgctggaacagttgctgggcctgaactttgagcagttt
tctcgtgcagttctgcttgcacaacatgaatttgcggcgtttttgaaagccaacagtgat
gagcgggcacaactgctcgaaactctgaccggcacggccaaattcagtgtcataggcaaa
gcgatttttgagcatcacaaagccaaacaagacgcactggcgcagcgcaaacagtcgctg
gatcatgtcaccttactcagcgacgaggcgctggctgaaaaccagcaaaccgcagctcag
ctgacggcggctatcgcacaggcccgtgaggaagaaaaactgctggagcaaggcattaac
tggtatcaggcctgtgacaagctagctcagcaatgccatcaggcagagcaggagcaagcg
cagtgtcagcaacacctgagtgcacaagcccaggatttcgaccgcgcccggcgtgcaaaa
gccgttgaggtgattgctgacaaccgcgctcaggcacgcgatacctctgtccggctcaag
cagttagacctggatatcggccaattgcagcagcaagattatgcaccgcagatccgcgca
gcggaggaagaactgcaagcagctcaggggcgactcagcgaagcgaaaaaccagttgcag
gtgtgcacccctgccctgcaatctttgcgtgaactggatcaacaacgtgaagcgaataaa
caactgctggcacaaagcagcgcggagtataacgccttgcttgagcaacatgaggtgttg
caacaacgaagtgaggcgcttgatactcagctgaacaccgatcgtcaacagcttacccag
ttacaacaagcctgtgaggccgacccggcgctgacgcaagcgagtgagcaatggccgcag
ataagcggttcattaaagcagtggcaagcgtgtcagggtcagctcaataagctggcggat
gagcaacaccaagcacagcttaatgccgataaagacaaacaagcacagcaggcgctacaa
cccagattaaccgagcagaaccggcagctggcagatattcaggccaggctgagtgccact
cagtctgagctcaacgcgctggattatgaaacattacagtttcagcgcactcagttggcg
caggcgcaacaaaaccagtcacagcgtgcccagttacagcaggagctgggcgagcaccgg
ctgcacattgaccgcctgcggcatcaacatcacagcctgcaacagcaactcaaagacacc
gagcagcaggatgagctgaccagacaacgcgtattgctgacccaggaaaatctgcagcaa
gtgcgatttcgtgccagtgacaacatcagcacactgagggcgcaactggttgccggacag
gaatgtatggtgtgcggctcgacggagcacccttatggcgtggagcatatcgacagccac
tggcaaacgctgattgcagactttgagtcgcaatatcaggctgccgagcaagcccgcgag
cagacacaacagcgatatcatgcgctggttggccaggctgagcaatgcaacggtcagtta
caggcggcactgcaacacgaagcgcagcttaatcgtaaactgacgcaaattgccgaggcg
ctggcgcaactgcccgctcagttgcgcgacaccgatgaccctcaggcacatcttgaacag
ctggataaaaagctgcaaacctacagccagctcagtaaaacacagcaacagctttggcag
caacagcaagcttgccagcatgaaatacagcagctggagcagcaaaaccagctgctacaa
agccagcttgaacgcgctgagcaggccagagcctatggacaaaccagacaagcggagctg
cagacggaacaacaagaggcactggctcaggtgcgccagctctacagtgcgccgcaatgg
tggcatgcctttgagcaggcgcctgagcaggccattactgcacttggcgagcaggtgcgg
gtcagacagcagcaacagcagcagatcagccagttacaacaaaagatcagtgaagatgag
cacactgcccagctgctgcgccagcaatgtcaggataagcaggcacagctcgataaagcg
gctcaggccagaaaggcgttgaccgacaaaggcgatgcgctgacacgtgagcgggtggcc
attcagccgcttgagatcagcgcagacaactggcatcagtctttgttggatgaacaacaa
caggctgaagccctgcaaactcaggcgactcagggcctggcccagctgcgtcaggcgcag
gagtctcaggccctcacgctggcacataagcagcaatctcagcagcagttacaagaagcg
cttgataaggttcaggcgcgctatcagagctggctagcggagctgcaaactcagtttgac
agtatgacagaagacgaggttgaggcactgctgcaatgggataaaagccagtggcaggca
ctgctggacgagcatgatgcactgagcaaagcgctacacagtgcacagaacaaacacgcg
catttgcaacaggagctacagacattacgcgccgagcctgtgacagagcaaagccaggcg
cagcttacagagcgactggcacagttacagcaagagcgtgatggtagccaggcaaagctt
atcagcgtcaatgctttactgaaacagcacgaagacaacaaagcctaccttgcagagcag
tatgaggcacttgaggcacaacaagccgaatatgagcactggcatttattaaaccgcctg
ctgggcgatgcgacgggcaaaaccatgcgcaacctggcgcagacccagacgctcaggatc
ttattgcaatatgccaaccatcatctttgcagcctgagcaagcgttaccgcctgaccgtg
attggtcagtcgctggaaatcgccattattgaccgcgatatggccgatgagcagcgcagt
gtgaacactttatcggggggcgagtcgttcctggtttctttagcgctggctttgggcctg
gcttcattgtcttctaatcaggtgcagatcaactcgttgtttatcgacgaagggttcggt
acgttagatccgcaaaccctcagtgtggcgctggatgcacttgatgccttgcaatctcag
gggcgcaaagtgggcgtgatctctcatgttgcggaaatgaccgagcgggttgccacccag
ataaaagtacaaaaacaggctggcggttattcgtcagtcaccatcagcgaacgataa
DBGET
integrated database retrieval system
