Pseudoalteromonas viridis: J5X90_20170
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Entry
J5X90_20170 CDS
T07232
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvb03032
]
J5X90_20170
03036 Chromosome and associated proteins [BR:
pvb03036
]
J5X90_20170
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_20170
DNA replication proteins [BR:
pvb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J5X90_20170
Chromosome and associated proteins [BR:
pvb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J5X90_20170
DNA repair and recombination proteins [BR:
pvb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J5X90_20170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
TFIIB
Motif
Other DBs
NCBI-ProteinID:
QTL38060
LinkDB
All DBs
Position
2:complement(436185..436460)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAQLVEKMAADAEISKAAATRALEAFTGAVTQSLKDGNSVALVGFGTFSVKERSARTG
RNPQTGAEIQIPAANIPSFKAGKGLKDQVNP
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaactagttgaaaagatggcggctgacgctgagatctcaaaagctgca
gcgactcgcgcgcttgaagcattcactggtgctgtaactcagtctcttaaagatggtaat
tcagtggcactggttggttttggcactttctctgtaaaagagcgttcagcacgtacgggt
cgtaacccgcaaactggtgctgaaatccaaattccagcggcgaatatcccttcatttaaa
gcgggtaaaggccttaaagatcaggttaatccttaa
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