Pseudoalteromonas viridis: J5X90_20175
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Entry
J5X90_20175 CDS
T07232
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_20175 (phrB)
Enzymes [BR:
pvb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J5X90_20175 (phrB)
DNA repair and recombination proteins [BR:
pvb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J5X90_20175 (phrB)
Prokaryotic type
J5X90_20175 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTL38061
LinkDB
All DBs
Position
2:complement(436692..438071)
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AA seq
459 aa
AA seq
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MSALFWFRRDLRIYGNEALIEAVENGARDALFLLCEQQWQQHNAAPVQVDLLKRRVVWLG
HKLAEFGIRLHVLDAGDFTKVPALLAQFCEKSEVQQVYANREYEVNEQARDLACQEAGIE
LKLFDGDLIAPPGSVTTASNEMYKVFTPFKKAWLKQYEQQHFYLPSWPELDLEPQQWQAP
ELLEGDASSEKWPVDDETLVKVVQTFIQDKMADYKEHRDFPGVKGTSGLSPYLALGIVSV
KQLLAEIQLHFPELLQMTSAPAFSWVNELIWREFYRHLICAYPKLCKGFNFNEKYNDVRW
REDDAQFKAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKHLLIDWRKGEHYF
MSKLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPISQSEKFDPQGDFIRKYVPELSDVP
AKSIHFPHDYLQAFAIEGYVDPIVDHKAARERALTAFKV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgttattctggtttcgccgtgatttaaggatttatggtaacgaagcgctcatc
gaagcggtagagaatggggcgcgtgatgcactctttctgctgtgtgagcaacaatggcaa
cagcacaatgctgcacctgtgcaggtagatttactgaaacgccgggtagtctggttgggc
cataagctggccgagtttgggatccgactacatgtgcttgatgctggtgatttcactaag
gtgccagcgctgctcgcccagttttgtgagaaaagcgaggtgcaacaggtctatgccaat
cgggaatacgaagtgaatgagcaggccagagatctcgcatgccaggaagccggcatagag
ctgaaactgtttgacggtgatttaatcgcaccaccgggcagtgtaacaacggcaagtaac
gaaatgtataaagtgtttacgccatttaaaaaggcctggcttaaacagtatgagcaacaa
cacttttatttgccgagctggccagaactagaccttgagccgcaacagtggcaggcaccg
gagctgcttgagggggatgcgagctctgaaaaatggccggtcgatgatgaaacgctggta
aaagtcgttcagacatttattcaggacaagatggctgattataaagagcaccgcgatttt
ccgggcgtcaagggcacctccggactcagcccatacctggcactgggaatagtctcagtt
aagcaattgcttgctgaaattcagctgcattttcctgagctgttacaaatgaccagcgca
ccggcgtttagctgggtcaacgaattgatttggcgcgaattttatcgccacctcatttgc
gcctatccaaagttgtgtaaaggatttaatttcaatgaaaagtacaatgacgttcgttgg
cgcgaggacgatgcacagtttaaagcgtggtgcgaaggaaaaacggggtacccgatagtg
gatgcggcaatgcggcagctcaaccagacaggctggatgcataatcgcttgcggatgata
gtcgcaagctttttaactaagcacctgttaattgactggcgcaagggtgagcattacttt
atgagcaagctgatagatggtgacctggcgagcaataatggcggttggcaatgggcggcc
agcaccgggtgtgatgcacaaccttatttccggattttcaatccaattagccaaagtgaa
aagtttgatccgcaaggggacttcattcgcaaatatgtccctgagcttagtgatgtaccg
gcgaaatcgattcactttccccatgattatttgcaggcatttgcaattgagggctatgtt
gatccgatcgtcgatcataaggctgcgcgtgaaagagccctgacggcgttcaaggtttaa
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