Pseudoalteromonas viridis: J5X90_20245
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Entry
J5X90_20245 CDS
T07232
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching protein GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00500
Starch and sucrose metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
Module
pvb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
J5X90_20245 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvb04147
]
J5X90_20245 (glgB)
Enzymes [BR:
pvb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
J5X90_20245 (glgB)
Exosome [BR:
pvb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
J5X90_20245 (glgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
QTL38075
LinkDB
All DBs
Position
2:complement(456726..458954)
Genome browser
AA seq
742 aa
AA seq
DB search
MNSASKSPIITHDYAAQISALNSGCFRDPFSFLGLHNSPEGSVIRVYMPGALTVSVNVDH
QTSAMQRIGDSALFVLAFSTKVSSGYHLTIEFSDTVITTRDVYDFSSALDESAMYLFNEG
SLEHGYLHFGARPLTHQGCEGTQFCVWAPNARSVSVIGEFNHWQPCQHFMRFHPASGVWD
LFVPHLKAEQGYKYAIVGVDGEVTERADPYAVKMQQAPGTASVIQPAQQSMPLSDAEQTR
RRQRNAIDAPIAIYEVHLGSWKRRDDEDNRYLTYRELADDLLPYVKALGFSHVQLMPITE
YPFDGSWGYQPVGLFAPTSRFGSLDDFRYFVAQCAELDLGILIDWVPGHFPSDPHGLHRF
DGTHLYEHADSRQGYHPDWNTYIYNYERPEVKSYLLSNANYWLDVFKLDGLRVDAVASML
YLDYSRNDGEWIPNQFGGRENLGAIDCIRAVNTRSYGRHPHIMMVAEESTAWPGVTQAVE
HNGLGFGYKWNMGWMNDSLSYMQRDPIHRKYHHHEMTFSMAYAYSENYILPLSHDEVVHG
KGALLSKMPGDDWQQFANLRAYYGFMYAHPGKKLLFMGSELAPRSEWDHNRGLDWSLLES
PPHMGIYQTIKALNHLYRDTPALYELDNSPCGFQWIDCHNGEQSVLSFARFGKSSNDLLV
VVSHFTPQVLHCYRIGVPRGGIYRVVFNSDDSNLYGSGTTPVAHQQQMVQSKAIASHGFE
HSIEITIGPLSTIYLQYMSADA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagcaagtaaatcgcccattattacccatgactacgcagcacaaatttcggcc
ctgaatagcgggtgttttcgtgatcccttctcttttcttggtctgcataacagcccagaa
ggctctgttattcgtgtgtacatgcccggcgcactgacagtatcagtcaatgttgaccac
caaaccagcgccatgcagcgaattggtgattctgctttgtttgtgctggcgttcagcact
aaggtgtcctcaggataccatttgacgattgaattttccgatactgtcattaccactcgc
gatgtctatgactttagtagtgcgctggacgagtctgcgatgtacttgtttaatgaaggg
tcgcttgagcatggttacttgcattttggagctcgtccgctgactcatcagggttgcgaa
ggcacgcagttttgcgtctgggcaccgaatgcgcgcagtgtttctgtgattggggagttt
aatcattggcagccatgccagcactttatgcgctttcatccggccagtggtgtgtgggat
ttgtttgtgccacatctcaaggctgagcaaggctacaaatatgccatcgtcggcgtggat
ggcgaggtgactgagcgcgccgacccttatgcggttaagatgcagcaagcccccggtacc
gccagtgtgatccagccggctcaacagagcatgccgctgagtgatgccgagcagacaaga
cgtcgccagcgcaacgcgattgacgcgcccattgccatttatgaagtacatttgggctcg
tggaagcgccgggatgatgaggataaccgctatctgacttatcgggagctggcagatgat
ttattaccctatgttaaggcgctggggttttctcatgtgcagcttatgccaattactgaa
tatccctttgacggctcgtggggatatcagcccgtggggctttttgcgccgaccagccgt
tttggctctttggatgactttcgttatttcgtagctcagtgtgcagagttagacctgggt
attctgattgactgggtaccggggcactttccgtctgatccccatggtttacatcgcttt
gacggcacgcacctgtatgagcacgcggacagccgtcagggctatcatcctgactggaac
acgtatatttataactacgaacgcccggaagtaaaaagttacctgctttctaatgccaac
tactggcttgatgtgtttaaactggatggattaagggtcgatgcagttgcctctatgctg
tatctggattactcgcgcaacgatggtgaatggatccccaaccagtttggcggcagagag
aaccttggcgcgatagactgtatcagagcagttaatacccgcagctatggtcgccatccg
cacattatgatggtagccgaggaatctacagcctggccgggggtaactcaggcggtggag
cacaatggattgggatttggctataagtggaacatgggctggatgaatgacagcctgagt
tacatgcaaagagatcccattcacagaaagtaccatcatcatgagatgactttttctatg
gcctatgcttactcagaaaattatattttgccactgagccacgatgaagtcgtgcatggc
aagggtgcgctgctgagtaaaatgccaggtgacgactggcaacagtttgctaacctgcgc
gcttactatggttttatgtacgcacacccgggcaagaagctgctgtttatgggcagtgag
cttgcgccacgttctgagtgggatcataaccgggggttggactggtctttgctcgagtcg
ccgccacacatggggatttatcagacaatcaaggccctcaatcacctgtaccgtgataca
ccagctttatatgaactcgataactcaccatgcggttttcagtggattgactgtcacaac
ggcgagcagtcggtgctgagttttgcccgcttcggcaaatccagtaacgacttattggtg
gtcgttagtcattttacccctcaggttttgcattgctatcgtattggggtaccccgtggt
ggtatttatcgcgtggtcttcaactccgacgacagcaatttgtatggcagtggcacaacg
ccggttgcacatcaacagcaaatggtccagagcaaggccatcgccagccatggctttgag
cacagcattgaaatcaccatcgggccattgagtaccatctatttgcaatatatgagtgca
gacgcctga
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