Pseudoalteromonas viridis: J5X90_20295
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Entry
J5X90_20295 CDS
T07232
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvb03016
]
J5X90_20295
Enzymes [BR:
pvb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
J5X90_20295
Transfer RNA biogenesis [BR:
pvb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
J5X90_20295
Prokaryotic type
J5X90_20295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QTL38085
LinkDB
All DBs
Position
2:complement(469838..470779)
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AA seq
313 aa
AA seq
DB search
MQIHFLGTSSGSPSLSRNMSATGVSFEKSKSWLLVDCGEATQHQLLKADLSPYHLSVICI
SHLHGDHCYGLPGLLASMAMSGRTEPVYLIAPQAVVQFVMSTLALTQVTLPFDLHTMAIE
QSDQCISLEFCYIEIIPLKHRVPSFGFKITEALIPRKLRIKQLHNEGIASGPHYNLLQKG
QDVIYQGQRLAADTYAFPSWRPRSVIVCGDNEKPSLLSSYCDDIDMLVHEATFTHPDLMR
VGTHTGHSDAKRVAQFAQQYQIPSLILTHFSVRYHGEGMLDVLEKEARAHFDGNLRLAYD
FLVLTVPKQLLSE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatacattttttaggaacctcgtcaggtagtcccagtctgagccgaaatatgtcg
gcaaccggggtcagtttcgaaaaatccaaatcctggttgctggtggattgcggtgaagct
actcaacatcagctgcttaaagcggacttatctccctatcacctgagcgtgatttgcatc
tctcatttacacggtgaccattgttatggcctgccagggttgttggcgtcaatggctatg
tcgggccgcactgagcctgtttacttgattgcgccacaggctgtggttcagtttgttatg
tcgaccctggcattgactcaggtcaccttgccttttgatttacatacgatggccatagag
caaagtgatcagtgtatttctctagagttttgctatatcgagatcatccctttgaagcac
cgggtgcccagttttggattcaaaatcacagaggcgcttattccacgcaaactgagaatt
aaacaattgcataatgaggggatagcatccgggccgcactacaacttgctacaaaaaggt
caggatgtcatttaccaggggcaacggcttgcagccgacacttatgctttccccagctgg
cgacccagaagcgtgattgtttgcggggacaatgaaaaaccctcgctgctgtcgtcatac
tgcgacgatatagatatgctggtgcacgaggcgacatttactcacccggatctgatgcgg
gttggcacccataccggtcacagcgacgccaaacgggtggcgcagtttgcccagcaatat
cagatcccttcgctcatactgactcactttagtgtgcgttatcatggtgagggcatgctt
gacgtacttgagaaagaagccagagcacactttgatgggaatttgcgcctggcgtacgat
tttttggttttaactgtgcctaaacagctactttctgagtga
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